Nymphaea colorata (blue-petal water lily): 116262311
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Entry
116262311 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116262311 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116262311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116262311
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116262311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
Zn_ribbon_RanBP
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
116262311
NCBI-ProteinID:
XP_031497413
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Position
10:2148969..2161151
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AA seq
726 aa
AA seq
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MPRKVSYGVDYDDDYDYYDDYDYDYDFEDAKGSSTSESLPKPGTWCCPICTYDNEEKLTY
CDICGVIRYPPVKSLSEKNEEAVDLCNGRGASKLAKSLFPALPAQKLKTGVTFQPVYSLS
KDVDGSHGIEKIKWKFSDFEDSFLNHDARYRFNIAPFKFDKPSPDDVVSAAKRSGNSLKG
TSHAALSKASLGTNMDQGTVDLLPNASKHGASSSRSSVEVVQFKAEDKRVDSKSYTSNGS
SLLEDGQPQSLVSGVSKLKLNEAADSTKTVRDMRKAVPLDAYKPETWVLPDKKCGGLSQL
NLAIVGHVDSGKSTLTGRLLHILGRISQKDMHKYEKEAKQQGKGSFAYAWALDESVEERE
RGITMAVAVARFESRKFHVVMLDSPGHKDFVSNMISGATQADAAILVVDASIGSFEAGMG
LNGVGGQTKEHAQLIRSFGVEQLVVAVNKMDSVGYSKERFDSINMQLGGFLRSCGFKESH
VSWVPLSVMENQNLVAAITEPRFSWYKGFHLLDAIDSLLPPEREIFKPLRLPICDVIKSR
SLGQAAVSGKVEAGAIRNGTKVLVMPSGDVATVRCIEQDSHACGIARAGDNVDVGLQGVD
GASLITGGVLCHPEFPIAVASHLELKVLVLDIKMPIIVGFQVEFHIHHAKEAAKVERIIS
LLDPKTGKVSKKAPRCLTSKQSAIIEVILGKELCVEEFSNYRALGRAYLRASGQTVAVGI
VTRLVH
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaaaagtgagttacggggttgactatgatgatgactatgactattatgacgac
tatgactatgactatgattttgaagatgctaagggttctagtacaagtgaatccttgcca
aaacctggtacttggtgctgtccaatttgcacatacgataatgaggagaagctaacatat
tgtgatatttgtggcgtaattcgatatcctcctgtcaaatcattaagtgagaaaaatgaa
gaagcagttgacttatgcaatggtcggggagcttcaaaactggccaaatctctgttccca
gcgttgcctgctcagaagttgaaaacgggtgttacctttcagcctgtttattctttgagc
aaagatgttgatggctcccatgggattgaaaagattaagtggaaattttctgattttgag
gattcttttcttaatcatgatgcaagataccgttttaatatagcacctttcaagtttgat
aagccttccccggatgatgtggtctctgcagcaaaacgttctgggaatagtttgaaagga
acctcacacgctgcattgtccaaagcttctttaggcacaaacatggatcaggggactgtt
gatcttttacctaatgcttcaaaacatggggcttcatcatcaaggtcttcagtagaagta
gtacagttcaaggcagaagacaagagagtggatagcaagagttacacaagtaatggttca
tctcttcttgaagatggtcaaccacaaagcctagtgagtggagtgagtaagttaaaactg
aatgaggcagctgattctacgaagacagtcagagatatgagaaaagcagttccattagat
gcatacaaaccagagacgtgggtgcttcctgataaaaaatgtgggggtttgtctcagcta
aatcttgctattgttggccacgttgattctggcaaatcaacgctgacaggaagacttctg
cacattttggggcggatctctcagaaggatatgcacaagtatgagaaggaagctaaacag
cagggaaaaggctcatttgcctatgcttgggcattagatgaaagtgttgaggaaagggaa
agaggaataactatggctgttgcagttgctcgttttgaatcaaggaaatttcatgttgtt
atgcttgattcaccggggcataaagattttgtctcaaatatgatatctggtgctacacaa
gcagatgctgcgatacttgttgtcgatgcatctattggttcttttgaggcaggtatgggt
ttaaatggagttgggggacagacaaaggagcatgcacaacttatccgaagttttggtgtt
gaacagctggttgttgctgttaataagatggattctgtaggatattctaaagaaagattt
gattccatcaatatgcagctgggtggatttctccgatcttgtggatttaaagaatcacat
gtttcatgggtacctttgagtgttatggagaatcagaatcttgttgcagctataaccgaa
cctcgtttctcatggtataagggatttcatctcctggatgccatcgattccttgctacca
ccagaacgtgaaattttcaaaccgcttaggttgcctatctgtgatgttatcaagtcccgg
tcactagggcaggcagctgttagtggtaaagtggaagctggagccatcagaaatggtaca
aaggtcctggtaatgccatcaggagatgtagcaacagttcgatgcattgaacaagattca
catgcatgtggtatagccagagcaggcgataatgtggatgttggtttgcaaggggttgat
ggggcttccttgatcacaggaggggtcttgtgccacccagaatttccaatagctgtggct
tcccatttagagctcaaagtgttggtcttggacatcaaaatgccgattatagttggattt
caggttgaattccatatacatcatgctaaagaagctgcaaaagttgagaggatcatatct
ttgcttgaccctaaaactgggaaggtttccaaaaaggctcctaggtgtctcacttccaag
cagagtgcaatcatcgaggtcattctcggtaaagaactgtgtgtagaggagttctccaac
tatagagctcttggaagggcatacctgcgagcatctggccagactgttgctgttggaatt
gtaactcgtcttgttcactaa
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