Nymphaea colorata (blue-petal water lily): 116262312
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Entry
116262312 CDS
T07418
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03015
mRNA surveillance pathway
ncol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116262312
09122 Translation
03015 mRNA surveillance pathway
116262312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncol03041
]
116262312
Spliceosome [BR:
ncol03041
]
Complex A
Other components
Complex A specific factors
116262312
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
116262312
NCBI-ProteinID:
XP_049936129
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All DBs
Position
10:complement(20115289..20122609)
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AA seq
562 aa
AA seq
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MAEMYGSGGGDQSAPPRGRGGGYGGGGGGDGGGGYGGGYQQQRGGGGYGGGGGGGGGGGY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NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaatgtatggttcaggaggcggagatcaatccgcgcccccgaggggccgcggt
ggtggctatggcggtggtggtggcggcgacggcggtggcggatatggcggtggttatcag
cagcaacgtggtggtggaggatacggtggtggaggcgggggcgggggcggtggtgggtat
aaccgtaatggcggaggcggaggcggaggcggaggagggtttgatcgtggtggaagcggt
ggtggggggtttgatcgcggtggcggaggccgcggcggcggaggtttcagaggaggaaga
ggcggcggctctggccgagatggcgattggcgttgccctaatccagggtgtggaaatctg
aattttgccaggagaactgagtgtaataaatgtggcgcaccctcccctggtggatctggt
gatcgcggtggcgctggtggggggtataatcggggaggaagtggaggtggtggtggttac
agtgggaatcgcggtggtcgcggcggtggcggaggtcgcggtggtggtggttatggcggt
ggcggtggcggtaactatggtgccggtggaggagggggaggcaactatggcagcggcggc
ggttctggcggtaactacggcagtggtggcggtgctggcggtaactacggcagtggtggc
ggtgctggcggtacctatggtagtggcggaagaggcgattcttatagtggatatgacagg
gatgatgggtcgtacggtcaagttcaaccacctgcaccaccttcttacggaagtgatggg
agcggtggtgctggaggaggaaactatcctcctcctccggctggccctccctcttatggc
gctcccgctccaccgagttatggagctactattcctcctcctggagggtatggtgcctca
ttgaatccgtatccagcaccaaatagctatggcggtccacctggtgggaattttggcaga
ggagagccgcccgcatctggatatgatggttatggccaagacaaagtaggcggcggctat
ggtgcgccaaggccagttcctggtcgtgatgattcacggaactctggtggaagctatggt
gcaccagccgatccacctgcggctgcaaaggtgaagcagtgcgatgaaaattgcggtgat
acttgcgataactctcggatatatatttcaaacttacctccagatgtaacgtcggatgaa
ctaagagagctttttgggggattggacaggtatcttgtcgataccatttgcactcatgtt
gatgccatttgcctgattgctgtgctgctgcgtgcaaaaaaatttctccagtggtgggaa
gattatcacaaattcatcaatgttggaagaataaaacagaaacgtgggtataaagatcaa
tggccttggaacatcaagatctacactgatgaatatggcaacagcaaaggggatgcggtc
ctctcttatgaggatccttctgcagcccattctgctggtggcttctacaacaattatgag
atgaggggctacagaatcaatgttgcaatggcagagaagtctgcaccaagggctccacct
gcttatggtcatgggggtagaggtggtggctatggtggtggtgatcgacgcagggataat
tatagagatggtggtgctggagggcctgataggcatggtcatggcgggcagcgttctcga
ccttactaa
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