Nymphaea colorata (blue-petal water lily): 116262404
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Entry
116262404 CDS
T07418
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116262404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116262404
03009 Ribosome biogenesis [BR:
ncol03009
]
116262404
04131 Membrane trafficking [BR:
ncol04131
]
116262404
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncol04147
]
116262404
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116262404
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116262404
Membrane trafficking [BR:
ncol04131
]
SNARE
SNARE associated proteins
Others
116262404
Autophagy
Aggrephagy
Other aggrephagy associated proteins
116262404
Exosome [BR:
ncol04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116262404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_2
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
AAA_28
ATPase_2
Parvo_NS1
AAA_18
IstB_IS21
Vps4_C
ABC_tran
Viral_helicase1
AAA_7
NACHT
NB-ARC
DUF815
TsaE
AAA_24
ResIII
AAA_lid_PRS2_C
Zeta_toxin
Sigma54_activ_2
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
116262404
NCBI-ProteinID:
XP_031497605
LinkDB
All DBs
Position
10:10515360..10521897
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AA seq
812 aa
AA seq
DB search
MTKSSSDAPATSSEPKGAKRDFSTAILERKKAPNRLIVDEAVNDDNSVVSMNSETMEKLQ
FFRGDTILIKGKKRRDTVCIVLVDDSCEEPKIRMNKVVRANLRVRLGDVVSVHQCPDVKY
GKRVHILPIDDTIEGVTGNLFDAYLKPYFLESYRPVRKGDLFLVRGGMRSVEFKVIETDP
GEYCIVAPDTEIFCEGEPVKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFK
SIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE
EAEKNSPAIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKTRAHVIVIGATNRPN
SIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLADDVDLERVAKDTHGYVGADL
AALCTEAALQCIREKMDVIDLEDDAIDAEILNSMAVTNEHFKTALGSSNPSALRETVVEV
PNVTWEDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI
ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVG
DAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEA
SRLQIFKACLRKSPVSKDVDLPTLARYTHGFSGADITEICQRACKYAIRENIEKDIERER
KRRENPEAMDEDDVDEVPEIKAAHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGFGSE
FRFPDRPESGSAAGAADPFATAGGGDDDDLYN
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatcgagctccgatgcaccggccacttcatctgagccgaagggtgctaagagg
gatttcagtactgcaatattggaacgtaagaaggctcccaatcggctgattgttgatgaa
gctgtaaatgatgataattctgttgtttcaatgaactctgagacaatggaaaagctccag
tttttccggggggataccatcttgattaagggcaaaaagaggagggacacagtgtgcatt
gttcttgttgatgattcttgcgaggagccaaagattagaatgaacaaagttgtgcgtgca
aatctaagagtacgcctaggtgatgttgtttctgtccatcaatgccctgatgtgaagtat
ggaaaacgtgttcacatactgccaattgatgacacaattgagggcgttacaggaaatcta
tttgatgcttatctgaaaccatacttcctggagtcctataggccagtgagaaagggtgac
cttttccttgtaagaggaggaatgaggagcgtggaatttaaggttattgaaacagatcct
ggtgaatattgtattgttgccccagacacagagatcttctgtgaaggagagcctgttaaa
cgtgaggatgaagagcgattaaatgaagttggctatgatgatgtgggtggtgtaagaaaa
cagatggctcagattcgtgaactggttgaacttccactcagacacccccagctgttcaaa
tcaattggggtgaagcctccaaaaggtatcctgctttatgggccacctggttctggaaag
acattaattgctagagctgttgcaaatgaaactggtgcctttttcttcttaatcaatgga
cctgaaattatgtctaaattggctggagaaagtgaaagcaacttgagaaaggcctttgag
gaggctgaaaagaattctcctgctatcatctttattgatgagattgactccatagccccc
aaaagagagaagacacatggtgaagtggagaggcgaattgtgtcccaactgttgacttta
atggatggccttaagactcgagcacatgttattgttattggagctactaatagaccaaac
agcattgatccagctcttagaagatttggaaggtttgatagggagattgatattggtgtt
ccagacgaggttgggcggttagaagttctcagaatacacacaaagaacatgaagcttgca
gatgatgttgacctggaaagagttgcaaaagatacacatggttatgtcggagcagacctt
gctgctctttgcaccgaggctgcccttcagtgcattcgggagaaaatggatgtcattgac
ttagaggatgatgcaattgatgctgagattcttaactcaatggcagtaacaaatgaacat
ttcaaaacagctctaggctcttccaatccatctgctttacgtgaaactgttgtggaggtt
cctaatgtcacatgggaggatattggtggcttggacaatgtgaaaagagaacttcaggag
actgtacagtatccagttgagcatcctgagaaatttgagaagttcgggatgtctccctcc
aaaggagtgctattttatggccctcctggctgtggtaaaactcttcttgcaaaagctatt
gcaaatgagtgccaggccaattttattagtgtgaagggtcctgagttgttaacaatgtgg
tttggagagagtgaagctaatgttcgggagatcttcgacaaagccaggcaatcagctccc
tgtgtccttttctttgatgaacttgactctatagcaactcagcgtggaagctctgtcgga
gatgctggtggtgccgctgaccgtgtcttgaatcaattgttgactgaaatggatggcatg
actgcaaagaaaactgtctttataattggagcaacaaacaggccagatattattgatcct
gccttgcttaggcctggtcgtttagaccagttgatttacattcccttgccagatgaagct
tctcgactccaaatcttcaaagcatgtctacggaagtcacctgtatcaaaggacgttgac
cttcctaccttggcacgctatactcatggttttagtggtgctgatattactgaaatttgc
cagagagcttgcaaatatgctatcagagagaacattgagaaggacattgagcgggagcgc
aagaggagggagaaccctgaggcaatggatgaggatgacgtagatgaagttccggaaata
aaagcagcacattttgaagaatccatgaagtatgctagaagaagtgtaagtgatgctgac
ataaggaagtaccaactctttgcccaaacgttgcagcaatctcgtgggtttggatcagaa
ttccgcttccctgacagacctgagtctggttctgctgctggagccgctgatccatttgcc
actgccggcggtggagatgatgatgatctgtataactaa
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