Nymphaea colorata (blue-petal water lily): 116262883
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Entry
116262883 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116262883
KO
K24155
rabconnectin-3a
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116262883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116262883
Membrane trafficking [BR:
ncol04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116262883
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
116262883
RAVE complex
116262883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
Beta-prop_EML
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT140_1st
EIF3I
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
116262883
NCBI-ProteinID:
XP_031498275
LinkDB
All DBs
Position
10:complement(15558044..15594337)
Genome browser
AA seq
2467 aa
AA seq
DB search
MEEDADVPAELLRCQLVPPAPNGTPNSIGWLRDFAGFSWLAYGAASVAVVTHVASPLSQR
EAAVGSFFYQVLEPDPPPGHSDPSIFTVPALSWCPSVPSDGTLAVALGSSISLYSPLPDC
PTGPSFRWRPITRLVQSCQVEAIEWTRSGDGLITAGIEVVAWKKNDRFWEVLWRAHPEVP
QALVSAAWSIHGTAATAAAAVTLISLPVGNSCPVQNETTKAIVWQSDRRSGIVEVKLNHP
QPVSMIEWRPFCSGKALATCREVLLTCSMDGVVRLWIEIGQGRGKKYTKGINDQKNNKPH
YYVAAVVEISQCLGGCLGIDTFVKWASEVPAVNDKGKKVIQCHGEVLHSDIAGRCEWLVV
VGPGTSLSLWAVHCLDDISPLRFPRLHLWKKVNMSDANATSTFYPDSSNFQSSLALLSAS
ISRTRLSGPPTWCSLLQLLPGGSFMWLHLDTLCPTVTLGTSSDQLSKDSSASISSCKLLT
QYGHDSNILQFAMCTCSFGIDLAASLDSDGHILLWSLSSSSNLYPGKPTPFQPAWKCRGR
ILSNNDCLGIKYSCLAWAPVLSNGNMLLLAGHTGGIDCLVIDLTNDASFEHHKVCTVPFS
DHNVNIGPDCIHTSPLHSTSPDKGACTSFMFLGVWMGIFQVLTWRFVVHLHDLVGKGCIG
NVTSDKVATYKSGFSGANYCITVGLCSSRFPDHNDTDIVTSVDVVHSGASTAAVLQTGDC
LAGCIDSAIYHMATGCSDGNLRLYRALQISDTFWIHWQLVGMFRAHVGAVDLISLSGGNG
KIATVNMSDSDACSCLHIWDSVSVMDEGCFILEDKIHFSDNINAINFQQMGNGLSLLGVC
LPSKLCIYSQKQFSDWDPIKSEFSLKVQNWVCIAHIHTSASSRSFMWGPRLSIVLLHEKY
ISIASQWSFATADECQADPYPEYFMDDSAGLRKEAHRDNCHHNDSVTKRGMTSTLDISEK
WCGSLPLYHPKALLLCLFLGNQGRAYAAVEHLVTSLYGNATSDVHEKSENVSKSGHGVYQ
IKLSKYFQGNCSLSVSHVGSHFQKDFLQENSTTPNAYYDRFTVRAGEPEIKRFSRILENS
SQIPYVGNVERTKILAVVDLLIEIIDREGATTYASFDEPARRFWVAVRFVKLHFHRKFGR
AALAEELIVDSSLIAWAFQSDCHENLLSSVLSSEPSWLEMKNLGVGFWFTNATMLRARME
KLARAQYLKNKDPKDCALLYLALGRIKVLAGLFKLSKDEKDKPLFGFLSRNFQEEKNRAA
ALKNAYVLMGRHQLELAVAFFILGGDHSSAVTVCAKNLGDVQLALIICRLLEGCGGELER
DLIANHILPSSIQKEDYWLASMLEWMLGHYYESYLCLLDGASLDCNPSKSDILHAATDPN
IGQYCAILATKSNIKNSLGDVKAAVLARWAMMMASLALARCGLPLQALELVSSGSSIGGK
IQGLVSGSGKVNTIYGILRPNSQTDPCNWLSGDVAPMLESCVRLNLALRCTSKFIIEHLS
SENAYLTYSTMGESLDIMSRHYEELADALYEKLQDGIFYFGTKYSINATGILNMIIHFAC
NIGKPFLGYHVTNTYLSSVHPQHKLHGTKNFIDHSFTTKAVIHITKELCYEFGRCVVALG
IMASVMKIDIQDTASNGKTDCRSPWEYHLYDLLQSVWYVKLFLKFLIDASTEVGFSLKIS
SDLDHLSYCICFALACLHQNSEVLLRLIQSILDIPEFIVDGKERNQSSQIIRHRDSFKSS
VPIIGTEHNRLLEKRGMSVESVCLNDERWQLLVACLWQNLFTFTSKILEVRKNENLLRSL
PASEPFLHPDPKMGDFNGSGTVKQIELFPLFVLEPLINAISYAFCGLTKELIFFLVEKLE
KNMDIVTLTWLSHVALVQSKVPVQLDEREIDSSKREHSEEALPFEHLWQTIVKPELVYNI
FAHEGISWLATLSNRCPSGWSSIHEGIVDEGGRGNGSFTIQDASGPSRTGHDKLYHPGNE
NYQGSLQTGSSSLRSRLNVCFDNKEIVKRNGELLEAICVNSCDEKQIAVASNRKGLLFYG
LNLEETSSNNTEYIWSESDWPQNAWARSLFASPGVDFGDQKSVHLGLGGATVGLSPLLRP
GRDLTGGGAFGIPGYAGIGASGLGWGEQEYLEEFMDPHVTVETISARAISSHPSRPLFLV
GSNNTYIYLWEFGKDTAAATYGILPAANVPAPYALASISALRFDHCGHRFATSSSDGTVC
TWQLEVGSMNNVQPTESSVCFQSYASDVTYLGSSGSILVAAGSSPNNANVVVWDTLAPAA
SSRVSLRCHEGGARSVAVFDHDIGTGSISPLIMTGGKAGDIGLHDFRFIATGKSKRHQIS
KERNVSLSRNLDANTGTSTKFEDNRNGMLWYLPKAHLGSITRISTIPNTCLFLTGSKDGD
VKLWDAKRSELVFHWPKMHDRHTFLQPSSRGFGGVVRAAVTDIQVIPGGFLTCGGDGVVR
LVQIRSL
NT seq
7404 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgctgacgtgccggcagagctgctcagatgtcaactagtaccgcccgcc
cctaacggcacgccgaattccattggctggctacgggatttcgcgggtttctcctggctc
gcgtacggagctgcatccgtcgccgtcgttacccacgttgcttcccctctctcgcagaga
gaagcggccgtcgggtccttcttttatcaggtgctcgagcccgaccccccgcccggtcac
tccgacccgtcgatcttcaccgttcccgccctctcctggtgcccctccgttccttccgat
ggcaccctcgccgtcgctttgggcagttcaatctctttgtattctccgcttccggattgt
ccaactggtccatccttcaggtggaggccaattaccaggcttgtgcaatcttgccaagtg
gaggcgatcgagtggacaaggtcaggtgatggtttgattacggcaggtattgaggtggtt
gcttggaaaaagaacgacagattctgggaagttctatggagagctcatccggaggttcca
caagccttggtttctgcagcgtggtccattcatggcactgcggcaacagcagctgcagct
gtaacgttgatctccttaccagttggaaactcatgtcccgttcagaatgagactacaaaa
gctattgtctggcagagtgataggagatctggaattgtggaagtaaaattaaaccaccct
cagcctgtctcaatgattgagtggcggccattctgctcaggaaaagctttagcaacatgt
agggaagttctgttgacatgctccatggatggagtggtgcgattgtggattgagattggt
caagggagaggcaaaaagtacacaaagggcatcaatgatcagaaaaataataaaccccac
tattacgtggctgcagttgttgaaattagtcagtgcttgggaggatgcctcggtattgat
acttttgttaaatgggcaagtgaagtcccagctgtgaatgacaagggcaaaaaagtgatc
caatgccatggagaagtattgcactctgacattgctggaagatgtgaatggttggttgtg
gttgggccagggacttctctttctttatgggctgttcattgcctagacgatatatcccca
ttgcggttcccacgcctgcatctgtggaagaaagtgaatatgtcagatgccaatgcaaca
agtactttttatcctgattcttcaaattttcaaagtagtcttgcacttcttagtgcttct
atatcaaggactagactttctggtccacctacttggtgttccttgctgcagttactacct
ggtggttcttttatgtggttgcacttggatacactgtgtccaactgttactttgggaaca
tcttcagatcaacttagcaaggatagtagtgcatctatatcttcctgcaagcttttaact
caatatgggcacgacagcaacattttgcagtttgctatgtgtacttgtagttttggaatt
gatcttgctgcttctttggattccgatgggcacattttattgtggtctctttcttcaagt
tcaaacttatatcctggcaagccaactccatttcagcctgcttggaaatgtaggggtaga
atactgtccaataatgattgcttgggcatcaagtactcatgtttggcatgggcaccggta
ctttctaatggtaacatgctccttttagctggacatacaggagggattgattgtttagtt
attgatctaactaacgatgctagttttgagcatcacaaagtctgtactgtaccattctct
gatcacaatgtgaacataggacctgactgtatccacacgtctcctttgcattccaccagt
ccagataaaggtgcatgtactagtttcatgtttttaggagtgtggatgggcatttttcaa
gttctgacttggagatttgttgtgcatttgcatgatttagttggcaaaggctgcattgga
aatgtaacatctgataaagtagctacttataaatctgggttttctggtgccaattattgc
atcactgttggcctctgctcgtcaaggtttcccgatcataatgacaccgacattgttaca
agtgttgatgttgtccattctggtgcatcaacagcggctgtactacagactggggattgt
cttgctggctgcattgatagtgctatatatcacatggctactggttgttctgatggaaac
ctgaggttatatagagcacttcagatttcagatactttttggattcattggcagcttgtt
ggcatgtttagagctcatgttggtgcagttgatctaatatccttgtctggtggtaatggg
aagattgcaacagttaatatgagtgattcagatgcttgcagttgcctccatatctgggat
tctgttagtgttatggatgagggatgctttattttagaggacaaaattcattttagtgat
aacatcaatgctataaattttcaacaaatgggaaatgggttatcattgttgggggtttgt
ttgccaagtaaactatgcatttattcacaaaagcagtttagtgattgggatcctataaag
tcagaattttctctaaaggtgcagaattgggtttgtattgcacatattcacacttcagcc
tctagcaggagcttcatgtgggggccaagattatccattgtgcttcttcatgaaaaatat
attagcattgctagtcagtggtcgtttgccactgctgatgaatgtcaggctgatccttat
cctgaatatttcatggacgattctgctggtttgaggaaagaggcgcacagagataactgt
catcataatgattctgttaccaaaagaggaatgaccagcacactcgacatatctgagaaa
tggtgtggatcgttgccactttatcatcccaaagcactccttttatgcttattcttagga
aatcaggggcgtgcttatgctgctgtggaacatcttgtcacatccctttatggcaatgct
acttcagacgttcatgaaaaaagtgagaacgtttccaaatctggccatggtgtttaccag
atcaagttgtccaaatatttccagggaaattgctcattatctgtctctcatgtgggatca
catttccagaaagattttctacaagaaaactcaaccacaccaaatgcttattatgataga
ttcactgtacgtgctggcgaacctgaaatcaagagattctctagaatactggagaattca
tctcaaattccttatgttggaaatgtggaaaggactaaaattcttgcagtggtagacctt
ttgatagaaattattgatagagagggtgctacaacatatgcaagctttgatgaacctgca
cgaaggttttgggttgctgtacgttttgtcaagttgcattttcatcgaaagtttggaaga
gctgctcttgctgaagagttgattgtggactccagcttgattgcttgggctttccagtct
gattgtcatgagaacctattgagttcagttctgtcgagcgaaccatcttggctggaaatg
aaaaatttgggggtcgggttttggtttactaatgcaaccatgctacgagcaaggatggag
aaattggctagagcacaatatctgaaaaacaaagatccaaaggactgtgcacttctttac
ctggcactgggcagaattaaggttttggctgggttgtttaaactaagcaaagatgagaag
gacaagcccctgtttggatttctttctcgcaatttccaggaggagaagaatagagctgct
gccttgaagaatgcttatgttttgatggggagacatcaactagagctagctgttgctttc
tttattcttggaggtgatcattcttcagctgtcactgtctgtgccaagaatcttggagat
gtgcaacttgccctcatcatttgtcggctcttagagggctgtggtggagaattagaacgt
gatttaattgcaaatcatatactcccttcatcaatacaaaaagaggactactggctggcc
agcatgctcgagtggatgctgggacattattatgaatcttatctgtgtttgcttgatggt
gcatcgctggattgcaatccttccaagtcagatatcctccatgcagcaactgatccaaat
ataggtcaatattgtgcaattcttgctacaaagagtaacataaagaattcactgggagat
gttaaagctgcagtactggcaaggtgggcaatgatgatggcatcgcttgccttggctaga
tgtggtcttcctcttcaagctttagaattggtatcttctgggagtagtattggcgggaaa
attcaaggtttggtatcaggttctggaaaagttaataccatctatggcatcttaaggcca
aactcacaaactgatccatgcaactggctttctggagatgtagctcccatgttggagtca
tgtgttaggctaaaccttgcactgcgatgcacgtcaaagttcatcatagaacatctttcc
tcagaaaatgcctacttaacatattcaaccatgggagaatcacttgatattatgtctcgt
cattatgaggagctggcagatgcactttacgagaagttgcaggatggaatcttttatttc
gggacaaaatattctataaatgctacaggaatcttgaacatgataatacactttgcatgc
aacatcgggaagccttttcttggatatcatgttactaatacctatctcagttctgttcat
ccgcaacataaacttcatggcaccaaaaacttcattgaccattcatttacaacaaaggca
gtgatccatatcacgaaggagctctgctatgaatttggtcgttgtgttgtagcattgggg
attatggcttcggtgatgaagatagatatacaagacactgcatcgaatggcaagactgac
tgcaggtcaccatgggaatatcatctttatgatttgctacagtcagtgtggtatgttaag
cttttcttaaagttcctcattgacgcttccacagaggtgggctttagcttgaaaatttca
agtgatctggatcatctgagctactgcatatgttttgctttagcatgtttgcaccagaat
tctgaagtacttctgcgattgattcagtctattttagatattccagaatttattgtggat
ggtaaggaaagaaatcagagttcacagatcatacgtcatagagattcttttaagagttct
gttccaattattgggactgagcacaacagattgctagagaagaggggcatgtcagtggaa
tctgtttgtcttaatgatgaaaggtggcaacttttggtagcttgcctgtggcaaaacttg
tttaccttcacttcgaaaatattggaagttcgtaaaaatgagaacttgttgcgatctcta
ccagcatcagaacctttcttgcatcctgatcccaaaatgggcgatttcaatggaagcggt
acagtgaaacagatagagctgtttcctctgtttgtactggagcctttgattaatgcaatt
tcttatgctttctgcggtctaacaaaggagctcatatttttcctggttgagaagctcgaa
aaaaatatggacattgtcaccttgacttggttaagtcatgtggccttggtgcaatcaaag
gtccctgtgcaattggatgaaagggaaattgattcttcaaaaagagaacatagtgaagaa
gcactcccatttgaacatttatggcaaacaattgtgaagccagagcttgtctataacatt
tttgcccatgaagggataagttggcttgcgactcttagcaacaggtgccccagtggctgg
agttctatccatgagggtattgtagatgaaggtgggaggggcaatggatcttttactata
caagatgcttctggtccttctagaactgggcatgataagctttatcatcctggcaacgaa
aattaccaaggctctcttcagacaggttcttcttctttaaggagtaggctcaatgtttgc
tttgataataaggaaattgtgaagaggaatggcgaacttctggaggcaatttgcgtcaat
tcctgcgatgaaaagcaaattgcagttgccagcaatcgtaagggcctacttttctatgga
ttgaacctcgaagagacttctagcaataatactgagtacatctggtcagagtctgactgg
ccacagaatgcatgggctaggtctctatttgcttccccaggtgttgactttggtgaccag
aagtctgtgcaccttggtttaggaggagcaacggttggcttgagtcctctgttaagacca
ggaagagatctaaccggtggaggtgcatttgggattccaggttatgctggtattggggct
tcaggcctaggttggggtgagcaggaataccttgaagagttcatggatccccatgtaaca
gttgaaaccattagcgcaagggccatctctagccatccttctaggcctttgtttttggtt
ggatctaacaacacatacatttacctttgggagtttggtaaggacacagctgcagcaact
tatggcattcttcctgctgcaaatgttcctgcaccttatgccttagcatcaatatcagct
ttaagatttgatcattgtggacatcgtttcgctacttcttcatcagatggaactgtatgc
acttggcaacttgaggttggaagcatgaacaatgtccagcccacagaatcatccgtctgc
tttcagagctatgcatcagatgtgacatacctgggttcaagtggatcaattcttgttgca
gcaggatctagccccaataatgcaaatgtggttgtttgggatacattagcacctgctgca
agttctcgtgtttctcttcgatgtcatgaaggtggtgcacggtcagttgcagtttttgac
catgacataggtactggttcaatttcaccacttatcatgacagggggaaaagctggtgat
attggactccatgactttcggtttattgcaactggaaagtctaaaagacaccaaatctcc
aaagaaagaaacgttagcctctctaggaatcttgatgcaaatacagggacatccacaaaa
tttgaggacaatcgaaacggaatgctgtggtatctaccaaaagcacacttagggagcatt
acgaggatatcaaccatcccaaatacttgcttgttcttgactggaagtaaagatggagat
gttaagctgtgggatgctaaaagatcagagcttgtgtttcattggcccaaaatgcatgat
agacacacgtttctccagccaagttctcgaggctttggtggagttgtacgggctgccgtg
acagatatccaagtcattcctggtggttttctaacctgtggtggagatggagttgttaga
ttggtccaaattcgcagtttgtag
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integrated database retrieval system
