Nymphaea colorata (blue-petal water lily): 116263038
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Entry
116263038 CDS
T07418
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116263038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncol03041
]
116263038
Spliceosome [BR:
ncol03041
]
Common components
Common spliceosomal components
SR proteins
116263038
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
116263038
NCBI-ProteinID:
XP_031498475
LinkDB
All DBs
Position
10:13186520..13195500
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AA seq
267 aa
AA seq
DB search
MSGRSSRTIYVGNLPGDIREWEIEDLFYKYGPVVDIELKNPPRPPGYCFVEFESARDAED
AIKGRDGYNFDGCRLRVELAHGGRGMSSSSDRRGGYGSGGGGGGGGGGRYGVSRRSEYRV
IVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGTMGLVDYTNSEDMKYAIRKLDDTEF
RNPFARSYIRVKCYEKSASRSRSPSKDRGRSRSRSRSRSRSPRRERSLSKSPQRSASRSP
SKPGPSRSASPVRASRSRSRSLSRSPA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgttcatctcgaacaatatatgttggcaatttgccaggtgatatccgagag
tgggaaattgaagatcttttctacaagtatggtcccgtagtggacattgaattgaagaat
cctcctcgccctcctggctattgttttgtggagtttgagagtgctcgtgatgcagaagat
gctatcaagggacgagatggatataactttgatggttgtcgcttacgtgttgagcttgct
catggaggtaggggaatgtcatcttcaagtgatcgtcgcggtggctatggtagtggtggt
ggcggtggcggcggaggcggcggccgttatggagtttcccgacgttcagagtaccgtgtt
attgtacgtggactgccttcatcagcttcatggcaagatttaaaggatcacatgagaaag
gctggggatgtttgctttgctcaagttttccgtgatggggatggaaccatgggcctggtg
gactacactaattctgaggacatgaaatatgcgatacggaaacttgatgacactgagttt
cgaaatccgtttgcacgatcttatatccgggttaaatgttatgaaaagagtgcatcaagg
agccgcagcccaagtaaagaccgtggaaggagtcggagtaggagccgcagcagaagccga
agtccaagacgagaaagaagcctaagcaaatctccacaacggtctgcctcaaggtcacca
tcaaaaccaggtccttccagatcggcttcccctgtgagggcatctaggtcacggtccaga
tctttatcccgaagtcctgcatag
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