Nymphaea colorata (blue-petal water lily): 116263055
Help
Entry
116263055 CDS
T07418
Name
(RefSeq) tryptophan synthase beta chain 1-like
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00260
Glycine, serine and threonine metabolism
ncol00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ncol01100
Metabolic pathways
ncol01110
Biosynthesis of secondary metabolites
ncol01230
Biosynthesis of amino acids
Module
ncol_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
116263055
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
116263055
Enzymes [BR:
ncol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
116263055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
116263055
NCBI-ProteinID:
XP_031498496
LinkDB
All DBs
Position
10:21884143..21887848
Genome browser
AA seq
470 aa
AA seq
DB search
MEATGIISNVSRNITSCPAVESAECDQRRLRPRPSIFSLERGGGLKRGAARLVHASNCIA
GGAAGMQTMGEVNLRIPADSRGRFGSYGGQFVPETLITPLRKLEDAFSKLIEDSSFQMEL
QVLLRDYAGRESPLYYAEKLSNYYKEVGAGVEIYLKREDLIHTGSHKINNAIGQALAAKK
LGYEHAVAATGAGQHGVAAAAACARMGLSCTVFMGTRDMERQPHNLLQMRTLGAEVRSVE
GNFKDAASQAIREWVSNLDTSFHLSGSLVGPHPCPSMVGEFQSVIGKEVRKQATERWGAG
KLPDVVLACVGSGSNAMGIFSEFLGDQKVRLIGVEAAGLGLGSGRHSATLARGEVGVFHG
SMSYLLQDDYGQMTDPHSIGVGLEYPGVGPQLSFLKDIGRVEYYTVTDAEAVNAFKRLCA
LEGIIPALEASHALAFLDKLCPQLPHGSRVVVNISGRGDKDAEMVLHHIQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaccggaattatctcaaatgtttcacggaacattacgagttgtccggcagtc
gaatcggctgagtgcgatcaaaggcggttgaggccacggccatccatttttagcctagag
agaggcggtgggctcaaacgtggagctgcccgtcttgtgcatgcaagcaattgcatcgcc
ggtggagcggcggggatgcagacgatgggagaggtgaacctcagaatcccggccgattcc
cgtggccgttttggctcctatggaggccagtttgtaccggaaaccttaataactccttta
agaaagctggaggatgctttcagtaagttgattgaggattcaagtttccagatggagctg
caggtactgctaagagactatgctggtcgcgaatcgcctttatactatgccgagaagtta
tcgaactactacaaggaagttggagctggagtggagatatacttgaagagggaagatttg
atccacactggatcacataagattaacaatgcaattggtcaggcattggccgcgaagaag
cttgggtatgagcacgccgtggctgcaaccggcgcagggcagcatggagtcgccgcggcg
gcggcatgtgccaggatgggcttgagctgcaccgttttcatgggcactagggacatggaa
cggcagcctcacaacctccttcagatgaggacccttggtgctgaggtaagatctgtagag
ggcaacttcaaagatgcagcatcacaagcaatcagggagtgggtgtcaaacctagacacc
agcttccacctctcagggtcactcgttggtccgcacccatgcccatcaatggtgggggag
tttcagtcagtcatcgggaaggaggtgaggaagcaagcaacagagagatggggagcaggg
aagctgccagatgttgttctggcctgtgtgggcagtgggtcgaatgcaatgggaatcttt
agcgagttcttgggagatcagaaggtgagactcataggtgtggaggcagcaggcttgggg
ttgggaagtgggaggcactctgcaactctcgccagaggggaggttggcgtcttccatggc
tccatgagctaccttctccaagatgactatggccaaatgactgatcctcactccattggt
gttgggttggagtatccgggagtcgggccgcagctcagtttcctcaaggatataggacgc
gtcgagtattacaccgtcactgatgcagaggcagtgaatgcattcaagagactgtgtgca
ttggaaggcataattcctgcattggaggcatcacatgctctggccttcctcgacaagctc
tgccctcagctgcctcatggctcaagggtggtggtcaacatcagtgggaggggcgacaag
gatgcagagatggtcttacaccatatacagtga
DBGET
integrated database retrieval system
