Nymphaea colorata (blue-petal water lily): 116263172
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Entry
116263172 CDS
T07418
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116263172
03036 Chromosome and associated proteins [BR:
ncol03036
]
116263172
Enzymes [BR:
ncol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116263172
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
Pre-60S particles
Helicases
116263172
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116263172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
116263172
NCBI-ProteinID:
XP_031498654
LinkDB
All DBs
Position
10:12026483..12032069
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AA seq
744 aa
AA seq
DB search
MPALRVSDPFFSSGSLEMKEEKKMKKKVEGLPETVAPLDMADLAKKKKKKNKEEALEREG
GDLETKKKTKKESKKRKVAEEDDDGETSTDRGEDTVARKEPKKMKLGERSSSDEESEVVV
DGDGEEDNPNAVSNFRISSALRERLKSKGIESLFPIQAMTFDTIFDGSDLVGRAKTGQGK
TLAFVLPILESLINGQNKASRKTGYGRSPSVLVLAPTRELAKQVHADFEFYGQAMGLMSC
CLYGGSPYHPQEFALKRGVDIVVGTPGRMKDHIERQNIDLRSLKFRVLDEADEMLNMGFV
DDVENILGKVEDLSKVQTLLFSATMPDWVKKIASRFLKPDKQTADLVGDDKMKASTNVRH
IVLPCFHSARQQIIPDIIRCYSSGGRTIVFTETKNSASELAGLLPGARALHGDIQQATRE
VTLAGFRSGKFMVLVATDVAARGLDINDVQLIVQCEPPRDVETYIHRSGRTGRAGNTGVA
VMLYDRKKSYMIPQIEKVAGVNFERISAPQPADIAKASGSAAAETVSNISDSVIPVFQAN
AQELLNSSGLSAVDIVAKALAKIAGYTEIKSRSLLTCQDNYVTMLLQAGRTMYTHTYAYG
ILRRFLPEEKVIGFRGLSLTADGQGAVFDVPKEDVDLVLAGQENADMVSVEVLDTLPPLE
DAGSKGQGRGGDGWRGRGRDSFGGSGGGFSNRSNGGFSSRSGGGFSSRGGRGGGGFSSRS
NRGSGGFQRRPGSGGGRGGYASRR
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccctcagggtctcggatcctttcttttcttccggctctttggagatgaaggaa
gagaagaagatgaagaagaaggtggaaggtcttcccgaaaccgtagctccgttggatatg
gcggatttggcgaagaagaagaagaagaagaacaaggaggaagctttagaacgtgagggc
ggggacttggagacgaagaagaaaacgaagaaggagagcaagaagaggaaggttgctgag
gaggacgacgacggagagacgagtaccgatcggggagaggatacggtggctaggaaggag
ccgaagaagatgaaactcggagagaggagttccagcgatgaggagagcgaggtggttgtg
gacggggatggagaggaggataacccgaacgcagtctcgaatttccgcatctcctctgcg
ttgagggagaggctcaagtccaagggaattgagtcgcttttccccatccaggcgatgacc
ttcgataccatatttgacggatcggatttggtcggtcgtgccaaaacggggcaggggaaa
accttagcgtttgtgttgcccatcttggagtctttaatcaatgggcaaaacaaggcatcg
aggaagacagggtatggaagatcgccaagcgtcttggttcttgcgccgacaagggagttg
gcgaaacaggtacatgcagactttgagttttatggtcaggctatgggtttaatgtcttgt
tgcctgtatggaggatctccttaccaccctcaagaatttgcacttaaaagaggtgttgac
atagttgttggaacccctgggcgcatgaaggatcacattgagagacaaaatattgacttg
agatcactaaaattccgagttcttgatgaggctgatgagatgttgaacatggggtttgtt
gacgatgtggaaaacattcttggaaaggttgaagatctgagcaaagtacaaacccttctt
tttagtgccacaatgcctgactgggtgaagaagattgcttctagatttttgaaaccagac
aagcagacagcagatcttgttggtgatgataagatgaaggcgagtacaaatgttcgtcac
atagttctcccctgctttcattctgcacgtcaacaaattattcctgatattatacgctgt
tatagcagtggagggcgtactattgtcttcactgagacaaagaattctgcgtcagagctt
gctggattgttacctggggcgagggctctccatggtgatatacaacaagcaacacgcgaa
gttacacttgctggattccgttcaggaaaattcatggttcttgttgcaacagatgtggca
gctaggggcttggacatcaatgatgtgcagttgattgttcagtgtgaaccaccccgtgat
gttgaaacttatattcatcgatctggacggactgggagagctgggaatactggagttgct
gtgatgctttatgaccgaaaaaaatcttatatgatccctcaaatagagaaagtggctggt
gtgaacttcgagcgcatttctgctccacagccggctgatattgctaaggcctccggttcg
gcagctgctgaaacagtctccaacatctctgatagtgtaatcccagtgtttcaagcaaac
gcacaagagcttttgaatagcagtggtctttctgctgtggacattgttgccaaagctttg
gcaaagatagctggctatactgaaataaagagcagatccttgctaacttgccaggataat
tacgtgaccatgcttcttcaggctggaagaaccatgtacacccatacttatgcatacgga
atcttgaggcggtttttgccggaagagaaggttattgggttcagaggcctctctctcact
gcagatggtcagggcgctgtatttgacgtgccgaaggaagacgtcgacttggttttagca
ggtcaggagaatgcggatatggtctccgtggaggtgctggatactttgccacctcttgaa
gatgccggcagtaaaggccaaggaagaggtggagatggatggcgagggagagggcgggac
agttttggcggcagtggcggcggcttctccaatcgtagcaatggtggtttctccagtcgt
agtggtggtggtttctctagtcgtggtggaagaggtggtggtggtttctccagcaggagt
aaccgtgggagtggtggctttcaacgccggccaggaagcggtggaggcaggggtggttac
gcctctcgcaggtag
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