Nymphaea colorata (blue-petal water lily): 116263372
Help
Entry
116263372 CDS
T07418
Name
(RefSeq) protein RAE1
KO
K14298
mRNA export factor
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116263372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116263372
03036 Chromosome and associated proteins [BR:
ncol03036
]
116263372
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116263372
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116263372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_Nup120_160
Marek_SORF3
Beta-prop_LRRK2
Vitelline_membr
Motif
Other DBs
NCBI-GeneID:
116263372
NCBI-ProteinID:
XP_031498944
LinkDB
All DBs
Position
10:complement(16207705..16221147)
Genome browser
AA seq
345 aa
AA seq
DB search
MSAGLSAGTNPGNPNKSFEVVQPPTDGVSSLSFSPKGNYLVATSWDNQVRCWEVNTSGGS
VPKASISHDQPVLCSAWKDDGTTVFSAGCDKQAKMWPLMAGGQATTVAMHDAPIKEIAWI
PEMNVLVTGSWDKTLRYWDTRQSTPVHTQQLPDRCYAITVRHPLMVVGTADRNLVVFNLQ
NPQAEFKRITSPLKYQTRCVAAFPDKQGFLVGSIEGRVGVHHLDDGQQSKNFTFKCHREG
NEIYSVNSLNFHPIHHTFATAGSDGAFNFWDKDSKQRLKAMARCNQPIPCSTFNSDGSIF
AYAVCYDWSKGAENYNPATAKTYILLHMPQEAEVKGKPRTGTGRR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctggtttaagtgcgggtacaaaccctggcaatcccaacaagtcatttgaggta
gtacagccaccaacagatggtgtttccagccttagcttcagccctaaaggcaattacctt
gttgctacctcttgggataaccaggtaagatgctgggaggtaaacacaagtggaggaagt
gtaccaaaagcatcaatctcgcatgaccagccggtactttgttcggcttggaaagacgat
gggactactgttttttcagcaggatgtgataaacaagctaagatgtggcctctcatggct
ggagggcaggcaacaacagttgcaatgcatgatgcgcctattaaagagatagcatggatc
ccggaaatgaatgttcttgttactggaagctgggacaaaactctcagatactgggatact
agacagtcgactccagtgcacactcaacagcttccagatcgctgctatgctattacagtt
cgtcatcctctcatggttgttggcactgcagatcgaaatctagttgttttcaatttgcaa
aatccgcaggccgaatttaagagaattacatcacctctcaagtaccaaactagatgtgtg
gctgcattccctgacaagcaaggatttttggttggttcaattgaaggaagagttggcgtt
caccatttggatgatgggcagcagtccaaaaacttcaccttcaagtgccatagagaagga
aatgaaatatactctgtgaactctttaaattttcatcctatacaccatacatttgcaact
gctggatctgatggtgcgttcaatttctgggataaggacagcaaacaaaggctgaaggct
atggcaaggtgcaaccagcctataccatgcagcactttcaatagtgatggatccatattt
gcatatgcggtttgttatgactggagtaaaggggcagaaaattacaatcctgcaacagcg
aagacatatattctactccatatgccacaggaagctgaagttaaaggaaagccacgaact
ggaacagggcgtagatag
DBGET
integrated database retrieval system
