KEGG   Nymphaea colorata (blue-petal water lily): 116263423
Entry
116263423         CDS       T07418                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
ncol  Nymphaea colorata (blue-petal water lily)
Pathway
ncol03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncol00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116263423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncol03019]
    116263423
   03041 Spliceosome [BR:ncol03041]
    116263423
   03032 DNA replication proteins [BR:ncol03032]
    116263423
Messenger RNA biogenesis [BR:ncol03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     116263423
Spliceosome [BR:ncol03041]
 Complex A
  U1 snRNP components
   Sm proteins
    116263423
  U2 snRNP components
    116263423
 Complex B
  U1 snRNP components
    116263423
  U4/U6.U5 tri-snRNP components
    116263423
 Complex C
  U2 snRNP components
    116263423
DNA replication proteins [BR:ncol03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     116263423
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 116263423
NCBI-ProteinID: XP_031499042
LinkDB
Position
10:12350965..12354679
AA seq 134 aa
MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGRMSQL
EHVFIRGSKVRFMIIPDMLKNAPMFKRLDARIRGKGSSLGVGRGRAVAMRARAQAAGRAA
PAALGRGAAPPVRR
NT seq 405 nt   +upstreamnt  +downstreamnt
atgagcagaagtttaggcatcccggtgaagctgctccacgaggcggcggggcatatagtg
actgtggagctcaagagcggcgagctttacagagggtccatgatcgaatgcgaggacaat
tggaactgccaactcgagaacatcacctacactgcgaaggatggaaggatgtcacagttg
gagcatgttttcattcgtggtagcaaagtcaggtttatgatcatacctgatatgctaaag
aatgcaccaatgttcaagcgtcttgatgcgcgaatcaggggaaaaggctcatccctgggt
gttgggcgtggccgtgcggttgcaatgcgtgcacgggcacaagctgcaggccgtgctgcc
ccagctgctcttggtaggggtgctgcaccaccagtgaggagataa

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