Nymphaea colorata (blue-petal water lily): 116263710
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Entry
116263710 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116263710
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116263710
04121 Ubiquitin system [BR:
ncol04121
]
116263710
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
90S particles
Other 90S particles
116263710
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116263710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Sof1
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
NBCH_WD40
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
PROPPIN
eIF2A
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_WDR19_1st
VID27
Motif
Other DBs
NCBI-GeneID:
116263710
NCBI-ProteinID:
XP_031499308
LinkDB
All DBs
Position
1:21541963..21553379
Genome browser
AA seq
452 aa
AA seq
DB search
MKVKVISRSEDEFTRERSRDLQRVFRNYDPSLHPQEKAVEYVRALNAAKLNKIFAKPFIG
AMDGHIDAISCMAKNSTHLKGIFSGSMDGAIRLWDIASRQTVCQFPGHNGAVRGLTVSTD
GKVLVSCGNDCTIRLWSVPVASSIGSYTKPEKPMEPISVYVWKNAFRGVDHQWDGTIFAT
VGAQVDIWDQNRSEPISSFAWGSDTVVSVRFNPAHQSILGTSASDRSITLYDLRTSTPLK
KIIMQTRTNALSWNPREPMNFTAANEDCNCYSYDMRKLEEAKCVHQDHVSAVMDIDYSPT
GREFVTGSYDRTVRIFQYNAGHSREIYHTKRMQRVFCVKFTCDASYVLSGSDDTNVRLWK
ANASEQLGVLLPRERKKQEYQDAVVDRYKYLPEIKRIVRHRHLPKPVYKASALRRTITDA
EKRREDRRKAHSAPGSVVTVPLRKRKIVASVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaaggttatttctcgatcagaagatgaattcacccgcgaaaggagtcgagac
ctccagagagtatttcgaaattatgatcccagccttcatcctcaagaaaaggcagttgag
tatgtccgggctctcaatgcagctaagctgaataagatatttgcaaaaccttttattgga
gccatggatgggcatattgatgctatttcatgcatggcgaaaaattcaactcatttgaaa
gggatattttcaggatcgatggacggagctattcgactatgggatatagcctccaggcag
acagtttgtcagtttcccgggcataatggtgctgtgcggggtttgacagtatctactgat
ggaaaagttcttgtatcatgtgggaatgattgcactattaggctttggagtgttcctgtt
gcaagttctattggatcatatactaaaccagaaaagccgatggagcctatatcagtatat
gtctggaagaatgccttcaggggggttgatcaccagtgggatggcactatctttgctaca
gttggtgctcaagttgatatatgggatcaaaacaggtcggagcccataagcagctttgca
tgggggagtgacactgtggtctctgttcgattcaatcctgcacatcagagcatattggga
acatcagctagtgaccgtagtataacattgtatgacctgcgtacttcaacacctctgaag
aaaattataatgcagacaagaaccaatgcactttcttggaatccaagggaaccaatgaat
tttacagcagccaatgaagattgcaactgttatagctatgacatgagaaaattggaagaa
gcaaaatgtgtgcaccaagatcacgtttctgcagtgatggatattgattattcaccaaca
ggtagagaattcgtgactggctcatatgatagaacagtaaggatattccaatacaatgct
ggacacagtagggaaatttatcacacaaagagaatgcaaagagtattctgtgtaaagttc
acttgtgatgcttcttatgttctttctgggagcgacgacacaaatgttcgcctatggaag
gcaaatgcatctgagcaactaggagtgctgcttccaagagaacggaagaagcaggagtac
caggatgctgtagtggatcgttataagtaccttccagagattaagcgaattgttaggcat
aggcatttgccgaagccagtctacaaggctagtgcacttaggcggacaatcactgatgct
gaaaagagaagagaagataggaggaaagctcacagtgcacctggttctgttgtcactgtt
ccacttcgtaaaagaaaaattgtggcatcagttgaatga
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