Nymphaea colorata (blue-petal water lily): 116264102
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Entry
116264102 CDS
T07418
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like isoform X1
KO
K03253
translation initiation factor 3 subunit B
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116264102
03012 Translation factors [BR:
ncol03012
]
116264102
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116264102
Translation factors [BR:
ncol03012
]
Eukaryotic type
Initiation factors
eIF-3
116264102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
ANAPC4_WD40
IKI3
Motif
Other DBs
NCBI-GeneID:
116264102
NCBI-ProteinID:
XP_031499946
LinkDB
All DBs
Position
11:6570510..6579731
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AA seq
733 aa
AA seq
DB search
MATDVLSNGPHSLGGPMEPTAATPHLVIDPSQIDVSRVDLDSIQLPPGENFGIISDDEDV
IESENLDFDSGFENVIVVDNLPVVGLDKFEKLEGVIRKIFGQIGTIKEKGLWMPLNQDTQ
KTHGYCFIEFSSKQEAESAKEKTNGYKLDRSHIFAVNMFDDFNRYMKVPDEWAPAEIKPY
TPGENLQKWLTDEKARDQFVIRSGTDTEVLWNDARQLKPELVYSRRHWTEKFVQWSPLGT
YLATVHRQGAAVWGGAATFNRLMRYAHPQVHLIDFSPGEKYLVTYSSHEPSNPRDTQTVV
LNIFDVQTGKVMREFKGRADEFATGGTGGLAGVTWPVFRWSGGRQAKYFARIGKNAVSVY
ETETFGLLDKKSIKVENVMDFSWSPTDAILALFVPEGGGGNQPARVSLLQIPEKQEVRQK
NLFSVSDCKMYWQSNGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDK
IIAFAWEPKGHRFAVIHGDSPRPDVSFYTMRTAHHTGRVSKLTTLKGKQANALYWSPTGR
FIILAGMRGFNGQLEFYNVDELETMATGEHFMATDVEWDPTGRYVATSVTSVHEMENGFH
IWSFHGKLLYRIPRDHFYQFLWRPRPPTLLSPEKEEEISKNLKKYSKKYEAEDQDVSLLL
NEQDREKRRLLQEEWDGWLKEWKQLHEEEKIYRQDLRDGEPSDAEEEYEAKEVEVEEILD
VTEEIVNFADEQE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggacgtgctatcaaatggtccgcatagtctcggcggccctatggagcctact
gctgctacgccccacctggtgatcgacccctctcaaattgacgtctcgagggtcgacctc
gattccatccagcttcctcccggcgagaacttcggcatcataagcgatgatgaggatgtg
atcgagagtgagaacctagacttcgattctgggttcgagaacgtcattgtagtcgataat
cttcctgttgtcggcctcgacaagtttgagaagctagagggtgtcatccgtaaaattttt
gggcagatcggaaccatcaaggagaagggtctctggatgcctttgaatcaggatacccag
aagactcatggatactgcttcatcgagttcagtagcaagcaggaagcagagtcagctaag
gagaagacaaatggctacaagctggatagatcacatatatttgccgtgaatatgtttgac
gattttaatagatatatgaaagttcctgatgagtgggctcctgctgaaatcaagccatat
acacctggggaaaacctacagaaatggttaactgatgaaaaagcccgtgatcagtttgtt
atacgttctggcacggacactgaggtgttgtggaatgatgcacgacaactgaagcctgaa
cttgtctatagtcgccggcactggacagagaagtttgtgcagtggtcccctctaggtaca
tatttggccacagtacacaggcagggagctgctgtttggggaggcgctgcgacgttcaac
cggttaatgcgatatgcacatcctcaggttcaccttattgatttttcgcctggagaaaag
tatttggttacatatagcagccatgaaccgagcaaccctcgagatacacagacggtggtg
ctcaacatttttgatgtgcaaactggtaaagtgatgcgagagtttaaaggacgtgctgat
gagtttgccactggtggaacaggaggtttagctggtgtgacatggcctgtatttagatgg
agcggtgggaggcaagccaaatattttgctagaattggcaaaaatgcagtcagtgtctat
gagacagagacttttgggctcctcgacaagaaatctattaaggttgaaaatgttatggat
ttcagttggtctcctactgatgccatcttggcgctgtttgttcctgagggaggtggtgga
aaccagcctgccagggttagtcttcttcaaattcctgagaaacaggaggtgaggcagaaa
aatctcttcagcgttagtgactgcaagatgtattggcaaagcaatggtgactatcttgct
gtaaaagttgacagatacaccaagacaaagaaaagcacatatactggctttgagctcttt
cgcataaaagaacgagatattccaattgaagttttggagcttgagaacaaaaatgacaaa
attattgcctttgcctgggagcctaaaggtcaccgatttgctgtcatccatggcgatagc
ccacggcctgatgttagtttctacaccatgcgaactgctcatcacactggtcgtgtctca
aagctcactacattgaaaggcaaacaagccaatgctctgtattggtctcctacaggccgc
ttcattatccttgctggcatgaggggtttcaatggccaacttgagttttacaatgttgat
gagcttgagaccatggcaacaggggagcatttcatggcaactgatgtagaatgggatcct
acagggagatatgttgccacatccgttacttctgttcatgaaatggagaatggtttccat
atctggtctttccatggcaagctgttgtacaggataccacgagaccacttttaccagttc
ttatggcgtccacggccaccaacgctcttgtcaccagagaaagaggaggaaatttcaaag
aacttgaagaagtacagtaagaagtatgaagcagaggatcaggatgtctcattgttgttg
aatgagcaggatagggagaagagaagactactgcaagaggaatgggatggatggctgaag
gaatggaaacagctccacgaagaagaaaagatataccggcaggacttgcgggatggggag
ccaagtgatgcggaggaagaatacgaggctaaggaagtggaggtggaagagatcttggat
gttactgaggaaattgttaattttgccgacgaacaggagtaa
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