Nymphaea colorata (blue-petal water lily): 116264121
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Entry
116264121 CDS
T07418
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
116264121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116264121
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116264121
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
DUF7885
LRR_4
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
116264121
NCBI-ProteinID:
XP_031499990
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Position
11:8025415..8031402
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AA seq
582 aa
AA seq
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MLTRKKKDVAGGGQGAGVPSFPDEVLEHVLAFVRSHKDRSAVSLVCKDWYAAERWTRSHV
FIGNCYSVSPEILVRRFPNIRSITLKGKPRFSDFNLVPANWGADIGSWLVVLAKAYPFLE
ELRLKRMAVTDESLDYLAQSFPNFRALSLVSCDGFSTDGLASIATHCRNLTELDIQENDI
LDLGGSWLSCFPENFTSLEALNFASLNSEVNFDALERLVSRCRFLKVLKVNKCVTPEQLQ
RLLVKIPHLAELGTGSFFQEPTPRLTAELSNAFSNCKKLHTLSGLWDVTPLYIPALSLAC
ANLTFLNLSYSVLQSTELVQLLAGCTQLRRLWVLDTVEDKGLEAVASSCPELEELRVFPA
DPFEPDLGGVTESGFVAVSSGCPKLSYVLYFCKRMTNAAVEKVAQNCPNFTHFRLCIMNP
WEPDYLTNEPMDEGFGAVVKHCSKIQRLAVSGLLTDRTFEYIGRYAKNLETLSVAFAGSS
DQGMQYVLQGCPKLRKLEIRDCPFGNAALLSGLERYESMRSLWMSACKVTINACKILARQ
MPRLNVEVIKEGESDEMQAEKVYVYRTVAGPRTDAPPFVLTL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaggaagaagaaggacgtcgccggcggtgggcagggcgctggagttccctcc
ttcccggatgaagttctggagcatgtcctcgcgttcgtgagatctcacaaggaccgcagc
gcggtttcgctcgtctgcaaggattggtacgcggcggagaggtggacccgatcccatgtg
ttcattgggaactgctactccgtctcgccggagatcctcgtccggcggtttccaaacatc
cggagcatcacgctcaaggggaagccacggttctccgatttcaacctcgttccagccaac
tggggcgctgacatcgggtcgtggttggttgtcctggcgaaggcctatcccttcctcgag
gagctgaggctcaagagaatggccgtgaccgatgagagcctagattacctggcgcaatcg
ttccccaatttccgggcgctctcgcttgttagctgcgatggatttagcaccgacggcctt
gcctcaattgctacacattgcaggaacttaacggagctggacatacaggaaaatgacata
cttgatcttggagggagctggttaagttgcttccctgaaaattttacatcacttgaagct
ctaaactttgcaagtttgaacagtgaagtcaacttcgatgctctagaaaggcttgtatct
agatgcaggtttctgaaagtcctgaaagtaaacaagtgtgtcacaccagaacaattgcag
aggcttcttgtgaaaattccacatctggctgagcttggaacgggatcctttttccaagag
cccaccccaaggctaactgccgagctcagcaatgcattcagcaattgcaaaaaattacac
actttgtcaggtttatgggacgtgacaccgttgtatattcctgcactatctctagcctgt
gcaaaccttacatttttgaatttgagttattcagtccttcaaagtaccgagttggttcag
ctgcttgctggctgcactcaacttcgacgcttatgggtcttggacactgttgaagataaa
ggattggaagcagtagcatcttcatgtccagagttggaagaactacgtgtttttcctgct
gatcctttcgagcctgatcttggtggtgtcactgaatctgggtttgttgctgtctcatcc
ggttgcccaaagttgagctatgtgctatacttctgcaagcggatgacaaatgctgctgtt
gagaaagttgctcaaaactgtccaaatttcactcactttcgtctctgtatcatgaaccca
tgggaaccagattatctcacaaatgagcccatggatgaaggctttggtgctgtggttaaa
cattgcagcaaaattcagaggcttgctgtatctgggcttctcactgaccgcacatttgag
tacattggcagatatgccaagaacttggagacactttccgtggcatttgcaggcagcagt
gaccagggaatgcagtatgtgttgcagggatgtccaaagttgcggaaactagagatcaga
gattgtccatttggcaatgcagccttactatcgggactggaacgctatgaatctatgcgg
tcattgtggatgtctgcttgcaaggtgacaatcaatgcctgcaagatactggcacggcag
atgcctaggctcaatgtagaggtaatcaaggaaggtgagagtgatgagatgcaggcagag
aaagtgtatgtatacaggacggtggccggccccagaacagatgcaccaccttttgttctt
accctctga
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