Nymphaea colorata (blue-petal water lily): 116264226
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Entry
116264226 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116264226 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
116264226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116264226
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
116264226
SSDB
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Paralog
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
Motif
Other DBs
NCBI-GeneID:
116264226
NCBI-ProteinID:
XP_031500187
LinkDB
All DBs
Position
11:19248927..19265455
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AA seq
569 aa
AA seq
DB search
MAKPGDGEKDWDQHLRAISLSARDSSSSSDPSVDASLLKSVQILHKTCKNENSGDLMARV
YPQINRLFQRSLASPKFQSSENGLLLLAILQFFLDFGDIVLHDADPSLQSFFRLCLSRQF
ADPIVAEATLSFLILNKEKILSSFPGLLPQFFPLLLKLIAWHGEKLEKSFLMVFPAMVAQ
GSFLPLFPSLVDLPILVIALEKVEKSSGSLIGSSIASMQKSTAPEMLLALMDEAYTGSSI
EDRGADSGDENDRSVDVADSLFLELLKDENEGLSERHWTSTGIAASLQAAIGTRQSDRLR
QSLHMSVRLLDVYFAIALEEVNDSLICALIPLLMTRHSTLFPDKNFIAEVRRSLLEFMLA
AFQRSPGFIAILKKPIIDRLGEAYDSSAKNELALQLCWAIGEHGGGGTSHKDTARELFES
LELLLYENISSSRLGLGKDPTASMDETIFGKSSQARLLCFVITAIAKLATCHRELLPRAR
VCLAKVARSRSSLDMRVWRRARDYLGLMNEPAICLSVLGPVSGCGPKPGTVNWSEGGSKM
VAHIPFYLLNEQEGPPFHDFSFTDVFPGQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccgggagatggagagaaggactgggatcagcacctgagagcgatatctctt
agcgcgagggattcatcttcctcatctgatccttctgtggatgcttctctccttaaatcc
gttcaaatcttgcacaagacgtgcaagaatgagaattctggggacttgatggctagggtt
tatccccaaatcaacaggctgttccagcgctcattagcgtctccaaagtttcaatcttct
gaaaatgggctccttttgttggccatccttcagtttttccttgattttggagatattgtt
ctgcatgacgctgatcccagccttcaatcattcttccgtttatgtcttagcagacagttt
gcagatcctatagttgcagaggcaacacttagtttccttatcttaaataaggaaaaaatt
ttgagttcattcccaggcttgctgccccagttttttccgttgctgctgaagttaatagct
tggcatggggaaaagttggaaaaatcctttttgatggtttttcctgcaatggtggcacag
gggtcgtttcttccactttttccatcgcttgtggatctgccaatactggtgatagctttg
gagaaggtggaaaagagttcagggtccctaatagggagcagcatagcatcaatgcagaag
agtacggcacctgagatgctgcttgcacttatggatgaggcctacactggctccagcata
gaagatagaggagcagattcaggggatgagaatgatagatctgtagatgttgctgattcc
ctgtttctggaacttctgaaggatgagaatgaagggttatctgagcgtcactggacgtct
actgggatcgcagcctcattgcaggcagctattggtaccagacaatctgataggctaagg
cagtctctccacatgtctgtgcggcttcttgatgtttattttgcaattgctctagaagaa
gtcaatgactctctaatatgtgctttgattccgttgctgatgacaagacactcaacacta
ttcccagacaagaactttattgctgaggtacggcgaagtctcctggaatttatgctggca
gcttttcagcgatcccccggcttcattgcaattttaaagaagcctatcattgacagactt
ggagaagcatacgacagcagtgctaagaatgaacttgcattacagttgtgttgggctata
ggcgagcatggaggtggaggaacatctcacaaggacactgctagagagctttttgagagc
ttagaattgcttctatacgaaaatatctcatccagtcgccttgggttaggcaaggatcct
acagccagcatggatgaaacaatctttgggaagtcatcacaggcgaggcttctttgtttt
gtgataacagctatagccaagcttgctacctgccaccgggagttacttccaagggctcgt
gtttgccttgctaaggttgctcgatctcgaagttctttggacatgcgtgtctggagacgt
gctcgtgattatttggggttaatgaatgaaccagctatctgcttgtcggtgctgggacct
gttagtggttgtggcccgaaacctgggactgttaattggagtgaaggtggctcaaagatg
gtagctcatattccattttatcttctaaatgaacaagaaggcccaccatttcacgatttc
tccttcacagatgtgtttcccggccagtga
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