Nymphaea colorata (blue-petal water lily): 116264230
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Entry
116264230 CDS
T07418
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
116264230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ncol03011
]
116264230
Ribosome [BR:
ncol03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
116264230
Bacteria
116264230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP4
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
116264230
NCBI-ProteinID:
XP_031500193
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All DBs
Position
11:complement(13115969..13124322)
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AA seq
505 aa
AA seq
DB search
MQARPLLSLPSSSFSLSRYLFIQIPLRPLKTCEGQPCSSPTPKSLFPSLKCNISRRPIFP
VAVDNENAELEPSESNDGSMNLLRRPASLPPSPENIKVSQDKGEDDKGEGEEVGEGDALA
PFLKFFKPRDSSDSSQEMDASESTEDVKRTTKAVDVEYYEPKVGDLVVGVVVSGNENKLD
VNIGADSLGTMLKKEVLPLYDEELPSLLCDLSKDAEDLMVSGKVGIIKDDEALDEGPVPG
RSIVELGTVLFAEVLGRTLSGRPLLSTRRLTRRIAWHRVRQIKIFNEPIEVKITEWNTGG
LLSRIEGLRAFLPKAELINRVNCFTDLKENVGRRLFVKISRVDEDKNDLIISEREAWDLL
HLREGTLLEGTVRKIFPYGAQIRIGETNRSGLLHITNITRGRLTAVSDLLTVDEKVKVLV
VKSNFPDKISLSTAELESEPGLFLLNKEKVFSEAEQMARRYRQRLPAISIPRNLDSVGQC
TLPFDDEATLYANWNWFRFEKGNEM
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctcgtcccctcctctccctaccctcttcctcgttttcactctctcgctacctc
tttattcaaattccgttacgccctctaaaaacttgcgaaggccaaccatgctcttctccg
acgccaaaatctctatttccatctctcaaatgcaacatttctaggcggcccatcttccct
gtcgccgttgacaacgagaatgctgaattagagccatccgagtctaatgatggcagcatg
aatttgctccgacgacctgcatcattgcctccttcacctgaaaacatcaaagtttctcaa
gataagggggaggacgacaagggcgagggggaggaggtaggtgagggggacgccctagcc
cccttcttgaagtttttcaagccaagagattcatccgacagtagccaagaaatggacgct
tcggagtctacggaagacgtcaagaggacgacgaaggcagtagacgtcgagtactacgaa
ccgaaagtgggggacttagttgttggtgtcgttgtttcggggaacgagaacaagctcgac
gtaaatatcggagctgattcattgggaacaatgctgaagaaggaagttcttcctctctat
gacgaagaattgccgagcctcttatgcgatttgagcaaggacgcagaggatttaatggtg
tccggcaaggtgggtatcattaaagacgatgaagcattggatgaaggcccagttccagga
aggagcatcgttgagttggggaccgttctgttcgcagaggtgctcggccggacactgagt
ggaagaccgttgctctcaacgaggagactcacgagacggatagcctggcatcgagtgagg
cagataaagatatttaatgagcctattgaggtcaaaattacagaatggaatactggtggt
cttctttcacggattgagggattgagagcattccttcctaaggcagagctgattaatagg
gtcaattgcttcacagatttgaaagaaaatgttggtcgccgactttttgtaaaaataagc
agagtggatgaggataaaaatgacttgataatcagtgaaagagaagcctgggatttgttg
catcttcgagagggaacacttctagaaggaactgtccgtaaaatttttccttatggtgca
cagattcggataggagagactaacagaagtggattgcttcatataaccaacattactcgt
ggacggctcactgctgtcagtgatttacttacggtagacgagaaggtgaaagttctagta
gtgaaatcaaactttcctgataaaatatctctgagtacagcagaactcgagagtgaacca
gggttgtttcttttgaataaggagaaagttttctccgaggcagagcagatggctagaagg
tacaggcagagattaccagcaatttctatacccagaaacttggactcagttggccagtgc
accctgccatttgatgatgaagcaacactttatgcaaattggaactggttcagatttgaa
aagggcaatgaaatgtaa
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