Nymphaea colorata (blue-petal water lily): 116264313
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Entry
116264313 CDS
T07418
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116264313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116264313
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116264313
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116264313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DH_ALS2
Motif
Other DBs
NCBI-GeneID:
116264313
NCBI-ProteinID:
XP_031500313
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All DBs
Position
11:complement(5435281..5436147)
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AA seq
288 aa
AA seq
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MSNDSVVIRSVWESNFRAEMNIVKQRAMSDHPFVSLTTRLLLCRERIPAGKAWGNPDINY
IGLRVTVNGFKDVVQVGLALCDKLGRLPLCKETGKPCVWEFNLKPLEAEPDVTKEERFLK
KFCSNVSAEQLRSEGIHPARFAADLRDCGLLMRRKISWVVFKGGLDFMALMRSWETQGAE
GLTLEYAEFFRLLAFYFPLFYDMAAVLGFHPVYDNGTIDVTARSINVWRECEPVEGAASD
SLLALRMFMRMKMMKKGCELLEKKAKVLFGVTSEQEAKAVPTFHMAPF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgacagcgttgtcatcagaagcgtatgggaatcgaatttccgcgcagagatg
aacatcgtaaagcagagagccatgagcgatcaccctttcgtctccctgaccacccgtctt
ctgttatgcagagagagaatccccgccggaaaagcctggggcaaccccgacatcaactat
ataggactccgggtgactgtcaacgggttcaaggacgtagttcaggtggggcttgccttg
tgtgacaagctagggaggctaccgctctgcaaagagacggggaagccctgtgtgtgggag
ttcaacctaaagccgctggaagctgaacccgatgtcacaaaggaggagcggttcttgaag
aagttctgcagcaacgtcagcgccgagcagttgaggagcgaaggaatccatccggcacgc
ttcgccgccgatttgcgtgactgcggcttgctcatgaggcgcaagataagttgggtggtg
ttcaaaggcgggctggacttcatggcgctgatgaggtcatgggaaacgcagggggccgag
ggcttaaccctcgagtacgcggaattctttaggctgcttgctttttacttccccttgttc
tacgacatggctgcggtgctcggtttccaccctgtgtacgacaacgggacgatcgacgtc
accgcgcggtcgattaacgtgtggagggagtgcgagcctgttgagggagcagcctccgat
agcctgctggcgttgcgcatgttcatgcggatgaagatgatgaagaagggctgcgagctg
ctggagaagaaggcgaaggtgctctttggagttacctccgaacaagaagccaaagctgtg
cctacgtttcacatggctccattttga
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