Nymphaea colorata (blue-petal water lily): 116264518
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Entry
116264518 CDS
T07418
Name
(RefSeq) probable CCR4-associated factor 1 homolog 6
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116264518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116264518
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116264518
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116264518
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
116264518
NCBI-ProteinID:
XP_031500655
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Position
11:complement(1707227..1711346)
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AA seq
286 aa
AA seq
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MINYDILTRHVWEDNFDEEMSIIRNSVVTNHPVVSLATRFSSCADRVPTGILWGDSAANY
SVLLETMERMEKLTQVGLAFSDQKGELPCCSETGRPWVWEFNLTPADEAADPDRKEGLSK
GSGGGVGTKKGINPWRLAADLWRCNLLMNDNVIWVVFKGGLDFVALLRWARLSVEGMPTE
LDEFLRLQRLYFPVCHDVAAALGFHSVLGDDGTIHVLARSLCVRMEEMPPSRPASDSLLA
LYLFTTMKRLPLGFYMLKHKVNVVFGLTAGEEADYALPTLGNISLV
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgatcaactatgacatactcacgagacacgtctgggaagacaacttcgacgaggagatg
agcatcatcaggaacagcgtcgtcaccaaccaccccgtcgtctctctggcaacccgtttt
tcttcctgcgccgacagagtccccaccgggattctctggggagactcggccgccaactac
tcggtacttctcgagacgatggagaggatggaaaagttgacgcaggtgggtctagccttc
tccgaccagaaaggggagctgccttgctgcagcgagaccgggaggccctgggtgtgggag
ttcaaccttacaccggccgacgaagcagccgatcccgataggaaggagggcctttcgaag
gggtcaggcggcggagtcggaaccaagaaagggatcaacccttggcgcctggccgccgat
ctctggcgctgcaacttgctcatgaacgacaacgtcatctgggtggtgttcaaaggagga
ttggacttcgtggcgctgctcaggtgggcaagactcagcgttgagggcatgcctactgag
ctcgacgaattcctgaggctgcagcgtctctacttcccggtgtgccacgacgtggcggcg
gcattggggttccactccgttctcggcgacgatgggacgatccacgtcttggcccgctcc
ttgtgcgtgcgaatggaggagatgcctcctagccggccggcctccgacagcctgctggcc
ctgtacctcttcaccaccatgaagcgtctgcccttgggcttttatatgctgaagcacaag
gtgaacgtggtgtttggcctcaccgccggagaagaagctgattacgcccttcctacgctt
ggcaatatatctctggtttga
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