Nymphaea colorata (blue-petal water lily): 116264552
Help
Entry
116264552 CDS
T07418
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00040
Pentose and glucuronate interconversions
ncol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116264552
Enzymes [BR:
ncol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116264552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116264552
NCBI-ProteinID:
XP_031500709
LinkDB
All DBs
Position
11:10689300..10693851
Genome browser
AA seq
510 aa
AA seq
DB search
MAGLSNYVLALVTVFSFLFSQPVYGGGCEEEVIKNHAARNLRCTEALLLRHSAREAHDGR
CTCLSAAIDHAREAQRLALPSRYEEVLSSVGRLVDCVCLQIEQNASIGAPPPGRALSDSF
NQACHQARLSFTVIRNLLVHCNPHKASSRSSGGEEGNYHSSSPLLPRKKLKQVGSCVADG
TKCQFLPCAKWKKLPRCAVGFASSVTGGAAGPYFTVTDPSDDPLSPRPGTLRHAIEAAGK
SPGGGWIRFDRAMTVVLEDRVWIGSNTTIDGRQANVTIVHKGLVLYGLENVILVNIKVVT
TGASDTIHIFQGARRVWIDHVTIEEGGLGLVTVAGGSTDVTVSNCYLKDRKFSMLLGASD
LDPSDKILRVTVYRNWFDSSGERMPHCRWGYCHVANNYYKHWNYYAIGGRKYAKILSEAN
VFEPGIRQEVTPWFEQFKDDLTPTIQSSDDLLLNNATFHQFLHNRTLEEPNRKFLNYHLP
MSPTHALVDLVKACSGALRGEILEKCLHLP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcgggattatcgaattacgtgcttgcgctggtgactgtttttagcttcttattctcc
cagccggtctatggtggtggctgtgaagaggaggtcataaagaatcatgctgcgaggaat
ctacgatgcacagaagctcttcttcttcgacattcggccagggaagctcacgatgggcgt
tgtacgtgcttgtctgctgccatcgaccatgctcgcgaggcgcagcgcctcgcacttccc
tcgagatatgaagaagttctgagcagtgtggggcgtctggtggattgcgtttgcttgcaa
attgagcaaaatgcttctattggtgcaccaccaccaggacgtgctctcagtgactctttc
aaccaagcgtgccatcaagctcgactgtccttcaccgtcattagaaacctgctcgtccac
tgcaacccgcataaggcaagcagcaggagcagcggcggcgaagaagggaactaccattct
tcatctcccctcctccccagaaagaagctaaaacaagttggcagctgcgtggccgacggg
accaaatgccagttcctcccctgcgccaagtggaaaaagctcccgcgctgcgccgtgggg
ttcgcttcctccgtcacgggaggcgccgcaggtccttacttcacggtgaccgatccgagc
gacgacccactgagcccgaggccgggaaccctgcgtcacgcgatcgaggcggcgggaaag
agccccggtggcggatggatcagattcgaccgagcgatgacggtggtgctagaggacagg
gtgtggataggctccaacacgaccatcgacgggaggcaggcgaacgtgacgatcgtccac
aaggggctggtgctgtacgggttggagaacgtgattctggtgaacatcaaggtggtgacg
acgggcgcgagcgacacgattcacatattccagggggcgaggagggtgtggatcgaccac
gtgacgatagaagaaggggggctggggctagtgacggtggcgggggggtcgacggacgtg
acggtatccaactgttacctcaaggaccggaaatttagtatgctgctcggcgcttccgac
cttgacccttctgataaaatcctcagggtcaccgtctaccggaactggtttgatagctcc
ggcgagaggatgccacattgcaggtggggatattgtcatgtggcgaacaattactacaaa
cactggaattactacgcaatagggggcagaaaatatgcaaagatactttcggaggcgaac
gtcttcgagcccggaatccggcaggaggtcacgccgtggttcgagcaattcaaagatgac
ctaacaccaaccatacaatcatctgacgatctcctgctcaacaacgcaacctttcatcag
ttcttgcacaatcgcaccttggaagaacctaacaggaagttcttgaattaccatcttcca
atgtcacccactcatgcactggtcgacttagtgaaggcgtgttccggcgccctgcggggg
gaaattctggaaaaatgtcttcacttgccgtga
DBGET
integrated database retrieval system
