Nymphaea colorata (blue-petal water lily): 116264637
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Entry
116264637 CDS
T07418
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116264637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncol03036
]
116264637
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
116264637
SWR1 complex
116264637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
116264637
NCBI-ProteinID:
XP_031500826
LinkDB
All DBs
Position
11:complement(17077355..17102015)
Genome browser
AA seq
2060 aa
AA seq
DB search
MASKGPRSKLDHETRARRQKALDAPKEPRRCKTHWDHVLEEMIWLSKDFEAERKWKLAQA
KRVAIRASKGFLDQAIRGEKKVKEEEHRLRKVAANISKEVKKFWVKIEKLVLYKHQLELE
ERKKKALDKQLDILLGQTERYSTMLAENLTDMPIPSEGLPRYSSNEQAIYQKKEGGFEPD
GMDDDDFSIQSDDELEDDEHTIEADEALITEEERKEELEALQNETHLPLEELLNRYSGAD
NKFCREGISSSKDNDIEVAKKEYDHITDSVQHKNLESDLGKHLDAGNLSIDSDNILSFSG
KIGGQNLDPVTAVEAGRQNEVVQLEHGEPSNLLSEDSKMEDAVSPSHFVGDAMDDKDYVI
PAGEERDDEATLDEEEELAKSEMNDPINEIRLLEQESEIPIEELLAHYKKERNTEQDESG
TEFASCEDELESSASSGGEPYIHSEEGCSIDNNQVKNEDFDLLKAQNSLDEEMDDGFGEK
PEGRENENRIADAAEAARSAQPTGNTFSTTKVRTKFPFLLKHPLREYQHIGLDWLVTMYE
KRLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVMLNWETEFLKWCPAFK
ILTYFGSAKERKFKRQGWMKVNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNW
KSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHLFQSHQEFKDWFSNPISVM
VEGQEKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPKKYEHVIYCRLSRRQRNLYEDFIA
SSETQATLASANFFGMISVIMQLRKVCNHPDLFEGRPIISSFDMVGIDRQLSSSICGLLS
YGPFSKVDLLGLSMLFTHLDFSMTSWEHEELAAIATPPSLIRAVTGLENVPKIESLPLSF
EHKKRSHGTNIFEDIRRALCEERIKQAHERAASVAWWNSLRCRKKPLYGTNLRELVTVRH
PVYDIHQHAKNPLCYLNFSSKLAEIVLPPVDRLQRILDVIERFMFAIPAARSPPPACWCS
KKGSSPVFEPTFKEQCGTTFGPLLMPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRR
LKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEQRQTLMQRFNTNPKIFLF
ILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLVSVSTIEE
NILKKANQKRALDDLVIQSGSYNTEFFKKLDPMELFSGQGAVTVTGRDDVLSNADVEAAL
KHVEDEADYMALKKVEEEEAVDNQEFTEETIGKLEEDEFVNEDDAKFDEKIPEVQSVSTV
VKPENGTPKDESYLKEDGGLILAGGGEDFDMLADVKQMAAAAAAAGQASSSFENQLRPIE
RYAMQFLDLWDPIIDRSSMDSQVSLVETEWDMEKIEKFKEDLEAEADDDDEPLVYERWDT
DFATEAYRQHVKVLAQRQLMEELESEAQENEDKDDERKKLKRKDRTGDMKAKSKKKLKKA
KFKSLKKGTLASDTEAAQKEPEVETTSVDEVVMSADYGLHSSIKKKRKKIPPLADEEKEA
KKTLKKLKKSPVDGSMFNSDSQDKQVSESKDLKSTEVVSSPDVKPPTRNKIGGKVSITPM
PIKRVLVIKPEKAKKKGNFRSKDFIAPPDSWSSREDAILCAIVHQYGAVWSLASDTLYSM
PTGGFYRGRYRHPVHCLERFRELFFKCISSATENVSSEKQVAVAAKALLKVTEDHVQVLL
DVASELPDNELLLQKHFTAVLSSVWRAKTKHDIWSNTASRGRHSHGNVCSSVSALTSLRS
MRKSTTSYTFSASSRNSKLVAWALKDAPGKQQEESLVSSSRQGSTVVAVQDQGASESSEH
VEITIEFLDDNCEEQSLLPSNISVSLQESVSFLQNDVLHDELLKDCSAHTADDRHRMASV
ACLEGECHSWATLAFQQSDVPTSRQTSKSLSTGKHKAISDSIKPPKPKTAKIIDVNEESA
VTKSGSAAPEDVHPKFPDAVYPVSPPPEFCSIFVGGTLDDIPPATLDVFEPLPQQYIPGM
VSGLEEFQGLQDLNEILLHI
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaaaggtcctagatctaagcttgaccatgagacaagagcaaggcgacaaaag
gcccttgatgctcctaaagagccccgtcgttgtaaaacacattgggatcatgttttagaa
gaaatgatttggctatcaaaggattttgaagcggagaggaaatggaaattggcacaagca
aaaagagttgctatacgggctagtaagggtttccttgaccaggcaataagaggagaaaag
aaagtcaaggaagaagaacaccggttgcgaaaagttgctgctaacatttctaaggaagtg
aaaaagttctgggtgaagatagagaaattggttctttacaaacaccaactagagctcgaa
gaaaggaaaaaaaaggcgcttgataagcagcttgatattcttttaggacagacagagagg
tactctacaatgctggcagaaaacctcactgacatgccgataccatccgagggattgccc
agatattcttcaaacgagcaagctatttatcaaaaaaaagaagggggatttgagccagac
ggtatggatgatgatgacttcagcattcagtcagatgatgaattagaagatgatgaacac
acaattgaagcagatgaagccctaataactgaggaagaacgtaaagaagaactggaagct
ttgcagaatgagactcatcttccacttgaggaattgctaaatcgatattctggggctgat
aataaattctgcagggaaggaatctcgagcagcaaggacaatgatattgaagttgctaag
aaggaatatgaccatattactgattctgtgcagcataaaaatttggagagtgaccttgga
aagcatcttgatgctggcaatctcagtatagatagtgataatattctatccttttctggg
aagattgggggacaaaatctggaccctgtcactgctgttgaagctggcagacagaatgaa
gtagttcagctagaacatggagagccttctaacctactttccgaagattctaagatggag
gatgcggtttctccttctcactttgttggtgatgcgatggatgataaggactatgtcatt
cctgcaggagaagagagagatgatgaagcaacattggatgaagaggaagagttggcaaaa
tctgaaatgaatgatcctataaatgaaatcaggttattagagcaggagagtgagataccc
atagaagagctacttgctcactacaaaaaggaaagaaacactgaacaagatgagtcagga
actgaatttgcttcttgtgaggatgaactggaatcatcagctagctctggtggtgaacca
tatatccatagcgaagaagggtgctcaattgataataaccaagtaaaaaatgaagatttc
gatcttctcaaggcacaaaattctcttgatgaagagatggatgatggatttggtgaaaag
cctgaaggacgagaaaatgaaaatagaattgcagatgcagctgaagctgctagatcagct
caaccaacaggaaatacattctcaacaacaaaagtacgcacaaagtttccattcctcctc
aaacaccctctgcgtgaatatcagcatattgggctggattggcttgttaccatgtatgaa
aagcggcttaatggaattttggctgatgaaatgggcttgggcaagacaattatgaccatt
gctcttcttgcccaccttgcttgcgataagggaatatggggtccccatctcattgtggtg
cctacaagtgttatgcttaactgggaaactgaattcctgaagtggtgccctgctttcaag
attctgacttactttggatctgcaaaagagagaaaatttaagaggcaaggttggatgaag
gtaaattccttccatgtatgcatcacgacttacagactggtcatacaagattctaaagtc
tttaagcggaagaaatggaagtacttgattctggatgaggctcatttaataaagaactgg
aaatctcaaagatggcaaactcttttgaacttcaattcaaaacgtagaatcctgttgact
gggaccccccttcaaaacgaccttatggagttatggtctttgatgcatttcttgatgcca
catttgtttcagtcacatcaagaatttaaggattggttcagcaatcctatttctgtaatg
gtagaggggcaagagaaggttaataaagaagttattgatcgtttacataatgtcctgcgg
cctttcatattgagaagattaaaaagggatgtagaaaagcaacttccgaagaagtacgag
catgtaatatactgtaggctctcaagaaggcaaagaaatttatatgaagattttattgct
agctcagaaactcaagcaacattggctagcgcaaatttttttgggatgatcagtgttata
atgcaactccgaaaggtttgcaatcatcctgacctttttgaaggtcgcccaatcatcagt
tcatttgacatggttgggatcgaccgacagctcagttcttcaatctgtgggttgctttct
tatgggccattttctaaagttgacttattggggctttcaatgctctttactcatctggat
ttcagtatgacttcctgggagcatgaagaattggcagcaattgctacaccaccctctttg
attagagcagttactggtctggagaatgtcccaaagattgaatccttacctttgagcttt
gagcataagaaaaggtctcatggaactaatatttttgaagatattcgaagggccctttgt
gaggaaaggataaagcaggcccatgaaagggctgcatctgttgcttggtggaattcttta
cggtgtagaaagaagcctctgtatggcacaaacctgagagagcttgtcactgttagacat
cctgtttatgacattcatcaacatgctaaaaatccattatgctatttgaatttctcatca
aaactggcagaaattgttctgccgcctgtagaccgtctccagaggatacttgatgtgatt
gagcgtttcatgtttgcgatcccagctgctcgatcacctccccctgcatgctggtgtagt
aagaagggttcttctccggtttttgaacctaccttcaaggaacaatgtgggacaaccttt
ggtccacttttgatgcccatcagacctgccattgtccggaggcaagtctattttccagat
agacggcttatacaatttgactgtggtaagctacaggaactggcaatattgctaagacgt
ttgaaatcagaaggtcatagggcactcatattcactcagatgacaaaaatgcttgatatt
ctagaggcatttataaatctctatggctatacttatatgcgattggatggttctactcag
ccagagcagagacaaacattgatgcagcggtttaacaccaatccaaaaatttttcttttt
atattatctaccagaagtggaggtgtgggcatcaacttggttggagcagatactgttatt
ttctatgatagtgactggaaccctgcaatggatcaacaagcacaagatagatgtcaccga
attgggcagacacgagaagtgcatatttatcggcttgttagtgtgagcacaattgaagaa
aatatcctgaagaaagcaaatcagaaacgtgctctggatgatcttgtcatccaaagtggt
tcttataacacagagttcttcaagaagcttgaccccatggaattgttctctgggcaagga
gcagttacggtcactgggagggatgatgttttatcgaatgcagatgtagaagctgccctg
aaacatgtagaggatgaagcagattatatggccttgaagaaagttgaggaagaagaggct
gttgataatcaggaatttacagaagaaacaattggaaagctagaagaagatgagtttgtg
aatgaggatgatgcaaaatttgatgagaaaattcctgaagttcagagcgtctctacagta
gtcaaaccggagaatgggactcctaaagatgaaagttatttaaaggaagatggaggtctt
attctcgcaggtggaggggaagactttgacatgctggctgatgttaaacagatggctgca
gctgctgctgcagcaggacaagcatcttcatcttttgaaaatcaacttcgtccaatcgag
agatatgctatgcagttcctggatctttgggatcctataattgacaggtcttctatggat
tcccaagtgagtttggtggagacagaatgggatatggaaaagattgagaaatttaaggaa
gatctggaagctgaagctgatgatgatgacgagcctctggtatatgaaagatgggatact
gattttgcaacagaggcatatcgccaacatgttaaggtgttagcacagcgccagttgatg
gaggaattggaatctgaagcacaggagaatgaggacaaagatgatgaaaggaaaaagcta
aaaaggaaagacagaacaggtgatatgaaggccaagtcaaagaagaagctgaagaaggcc
aagttcaagtctttgaaaaaagggacactggcttctgatactgaagcagcacagaaagaa
cctgaggtagaaactacatctgttgatgaagttgtgatgtctgctgactatggtctacat
tcatcaataaagaagaaaaggaagaagatcccacctctagctgatgaagaaaaggaagca
aagaagaccttgaagaaacttaagaagtcccctgtggacggttctatgtttaattctgac
tctcaagataaacaagtatcagaaagtaaagatctgaagtccactgaagttgtcagcagt
cctgatgttaaaccaccaaccagaaataaaatagggggaaaggtttcaatcacaccgatg
cctattaagcgtgttctggtgataaagcccgaaaaagcaaagaaaaaggggaattttcgg
tcgaaagattttattgcgccacctgattcctggtcctcacgggaggatgctattttatgt
gcaattgtacatcaatatggggctgtgtggagcttagcgagtgatacactctactccatg
ccaactggtggtttttatagaggcagatatcgtcaccctgttcattgtcttgaaaggttc
cgagagttgttcttcaaatgcatctcatctgccacagagaatgtcagcagtgagaaacaa
gttgctgttgctgccaaggctcttctcaaagtaacagaggatcatgttcaggttctcttg
gatgttgccagtgagctgcctgataatgagctgctccttcagaaacattttacagctgta
ctttcttctgtctggagagcaaagactaaacatgatatctggagtaacacagcttcacgg
ggtagacattctcatggtaacgtatgttcatcagtttctgctttgaccagtttgaggtcc
atgaggaaatccaccacaagctatactttttctgcatcatcccgaaacagcaagttagtg
gcatgggcactcaaagatgctcccgggaaacaacaagaagagtcgttggtgtcctcaagt
cgccaaggttcaacagtcgtggcagtgcaggaccaaggagcatctgaatcttcagagcat
gtggagataacaatagagttcctagatgacaactgtgaagagcaatccctcttgccttca
aatatctctgtatcattgcaggaatctgtatcattcctacagaatgacgtactgcatgat
gaattactaaaagattgttcggctcatacagctgatgaccgtcacaggatggcatcagtg
gcctgcttagaaggagagtgtcatagctgggcaacattagcattccaacaaagtgatgtg
cccacttcccgccaaacttccaaatcattgtctacaggaaagcacaaggctatttcagat
tcaattaagcctccaaaaccaaagactgcaaaaattattgatgtgaatgaggaatctgct
gttactaaatctggttctgctgcaccggaggatgtacatccaaaatttccagatgcagtt
tatcctgtatcacctccaccagaattttgctcaatctttgttgggggcactttggatgat
attcctccagcaacgttagatgtctttgagccactgcctcagcagtacattccaggcatg
gtttctggtcttgaagaattccaggggttacaagatttgaatgaaattctcctacatatt
taa
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integrated database retrieval system
