Nymphaea colorata (blue-petal water lily): 116264908
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Entry
116264908 CDS
T07418
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116264908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116264908
03036 Chromosome and associated proteins [BR:
ncol03036
]
116264908
Enzymes [BR:
ncol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116264908
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116264908
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
116264908
Noncanonical PRC1 (PRC1.1)
116264908
Noncanonical PRC1 (PRC1.3/1.5)
116264908
Noncanonical PRC1 (PRC1.6)
116264908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-rbx1
P16-Arc
DUF7044
zf-Nse
zf-RING_6
zf-RING_10
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
116264908
NCBI-ProteinID:
XP_031501225
LinkDB
All DBs
Position
11:complement(7767197..7778160)
Genome browser
AA seq
561 aa
AA seq
DB search
MRAESSAVSLPKQPNYRMQHTQNRDFRERRRRASVGLSHFSGTQFVGAAREEEKDEEMPA
QKRASDEDDSSPGSPAVKEEEEEDDEGDEGEAEGGEGAGGGGGGGGGGGEAEVVAEEEAE
EKEAERHDSEGSPSSSSGEKDEFVLVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRE
CIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAAIYPDIDKYEEEELAFHEEEKTR
NKQIQASIAQTLRRQSEALARRRNTAKATAAAFARKAHGNYRSGHGQNSYLRGKGKNNHE
TGNTAASDDEDEDDANGNEGAKDSSSADDPSPDFRQKRIKRWTGQSRSSPMRTSMNADAA
CDENDELEVSRESTGASPGLGGNPEVLVWGGGGIRSHTRYGSVSGSNGKFSRCSRMSKLM
DYLVSRSSEENDDGFDIHFLLISWNEECVPNLQQPYLCCRPTLSVNHLCQFIALQLPVQA
EDLEIMVDKSGSKVINQLGPGLDLSTPTNQHFNPKFDFSGEKLETLGSQETLAGIYTNYA
SSQGDMVLVYRQKSSALDGRP
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccgagtcgtcggcggtctcattgccgaagcagccgaactatcgtatgcagcac
acgcaaaatagagatttcagagagaggaggaggagagcgagcgtcggcctgagccatttc
tcggggacccaattcgttggcgcggcgagggaggaggagaaggacgaggagatgcctgct
cagaagcgcgcttcggacgaggacgactcttctcctgggtctcctgccgtcaaagaagaa
gaagaagaagatgatgaaggtgacgaaggagaagcggaaggaggagaaggggcgggagga
ggaggaggaggaggaggaggaggaggagaagctgaggtggtggcggaggaagaagcggaa
gagaaggaagcagaacgccacgattcggagggcagcccttcgtccagcagcggcgagaaa
gatgaatttgtccttgtaaagttgtcagacatacggaaggaggtacagtgccccatctgt
ctagggatcataaggaagacaagaactgtgatggagtgcctgcatcgcttttgcagggaa
tgcattgacaaatcaatgagacttgggaataatgagtgtcctgcctgtcgtacacactgt
gcaagccgtcgttctttgagagatgatccaaactatgatgctctaatagcagccatatac
ccagatattgataaatatgaggaagaggagctggcctttcatgaagaggaaaagacccga
aataagcagattcaagcatctattgctcagacgcttcgtcgacaatcagaggcacttgct
agaaggcgcaacacagcaaaagcaacagctgcagcctttgcaagaaaagctcatggaaat
tatcggagtggccatggacaaaacagctacttgagaggaaagggtaagaataaccatgaa
actgggaatacagcagcctctgatgatgaggatgaggatgatgcaaatggcaatgagggt
gccaaagattcatcttctgcagatgacccttctcctgatttcaggcagaaaaggattaaa
cgatggactggacagtctcgttcttcacctatgagaacttctatgaatgcagatgctgca
tgtgatgaaaatgatgaattggaagttagtagagaaagcactggtgcttctccagggtta
ggtgggaatcctgaagttcttgtttggggagggggaggtatcagaagccatacaagatat
ggtagtgtgagtggatcaaatggtaagttttctagatgcagccgcatgtcaaagcttatg
gattaccttgtgagtagaagttcagaggaaaatgatgatgggtttgatatacatttctta
ctcatatcctggaatgaagagtgtgttcccaatttgcaacagccatatctatgttgtcga
ccaaccttgtctgtgaaccatctgtgccagttcattgctctccagttacctgttcaagct
gaagatctggagataatggttgataaatctggaagtaaggtcatcaatcagttgggacca
gggcttgatctatcaacaccaactaatcagcacttcaaccccaaatttgacttttcgggg
gagaagctggaaactttgggaagtcaagaaactctagcaggaatctacactaattatgct
agtagtcagggtgacatggtattggtatatcggcagaaatcatcagctcttgatggaaga
ccatga
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integrated database retrieval system
