Nymphaea colorata (blue-petal water lily): 116265171
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Entry
116265171 CDS
T07418
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116265171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncol03041
]
116265171
Spliceosome [BR:
ncol03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
116265171
Complex B
116265171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
AEP-TOTE
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
116265171
NCBI-ProteinID:
XP_031501574
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All DBs
Position
12:15263980..15268460
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AA seq
191 aa
AA seq
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MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQKVKQHLVG
QTTYQQQVGVAFNQHLVSLPSALPRPRLPVLPPPVMPVGAPSQAHPNAPLMPGIHPPVFP
RPAPGTPGYAMPPVVMPPGASSVSLHPNGLPMPPASNMPSSVPGAPLVPSNAPPGSNPGG
YLGNPTTIGSA
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgccacggtattattgtgactattgcgatacatacctgacacatgactcgccatctgtt
agaaagcaacacaatgcaggatacaagcacaaggcaaatgtgcgctcctattatcaacaa
tttgaagagcagcaaacacaaagcttaattgatcaaaaggtgaaacagcatcttgtgggg
cagaccacatatcagcagcaagtcggtgtagcttttaaccagcatcttgtttctctccct
tcagcactacccagacctcgccttcctgtccttccacctcctgtcatgccagtcggcgca
ccttcgcaagcccatccaaatgcacctttgatgccaggaattcatcctccagtgtttccg
cgtccggctcctggtacaccaggatatgctatgccacccgttgtgatgccgcctggtgca
tcttctgtgtcactgcatcctaatggtctgcccatgccaccggcctctaacatgccctcg
tcagtgccaggtgcaccattagtacctagtaatgctcctcctggaagtaaccctggaggc
tatctagggaatccaaccacgataggctcagcatag
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