Nymphaea colorata (blue-petal water lily): 116265255
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Entry
116265255 CDS
T07418
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116265255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncol03041
]
116265255
Spliceosome [BR:
ncol03041
]
Complex A
Other components
Complex A specific factors
116265255
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
RRM_1
KH_1
KH_12
RRM_5
RRM_7
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
116265255
NCBI-ProteinID:
XP_031501672
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All DBs
Position
12:complement(11176244..11178112)
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AA seq
622 aa
AA seq
DB search
MDLEGKQSSEEFSSKRKPKLSDGVINQGDDEHGSSNSYAGDGDAAPSEGSAGGSGKRMRS
GWEPQNGVEAETAAGDATPMRKKSRWANDDSKFLKILGPMQLPDFIKPLPSEDDNDPEVQ
TLKLQLSEIGRKLQVGQGPDDVVDGSISPSPEPIYDNQGVRINTREFRVHELLARKRLEL
ISQLIQKNPSFKPPVAYKPPRPCKKLYIPVTEYPDYNFIGLIIGPRGNTQKRMEKETGAK
IIIRGKGSVKEIKNPKNRDLKFDFSESEDLHVFIEAETQQSLDAAVSMVEKLLVPVEGLN
EHKRAQLRELAELNGIVKHDGFCRLHGGPGHGHSTSKTDAICHTSGDFGHPSIGCPLKRS
AKRNRMAGEHCSSVPEHSRRGSRGSLVCQTRPGHSPAAPAADVVASWGGSSVLVNSSGYN
ISSQASGFGSTSMPIHKYNGVDGANLYVGYLPRAIDCEQLMHLFSPFGRVLEAKVIKDRR
TGLSKGYGFVMYADEVTAFCAATHMNGYRLDGRSLVVRLAARAPPTGAVGHGLSSGDTEQ
STSLLLSAPNADPFAWYGPPIMKLPSSYSSCNNAGMLPSSGYVGAVDPFRRRQLSSSYGA
HEIPNAYAENACVAWREFKPSW
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaaggaaaacaatcctctgaagaattttcttcgaaaagaaaaccaaaactc
tctgatggcgtgataaaccaaggagatgatgaacatggcagctcaaattcatatgctggt
gatggagatgctgcaccgtctgagggaagtgcaggcggctctggtaaacggatgcgtagc
ggatgggagcctcagaatggagttgaagcagaaacagcagcaggtgatgcaacgcctatg
aggaaaaaatcaagatgggccaatgacgactcgaaattcttgaagattttggggccaatg
cagcttcctgacttcataaagcccctcccaagtgaagatgacaatgaccccgaagttcag
acactgaaattgcagctttcagagataggcaggaaactacaagttggacaggggcctgat
gatgtggttgatgggtccatctctccttctccggagcctatatatgacaaccaaggggtc
agaataaacacgagggaattcagggtccatgaactgcttgcacggaaaagactggaatta
atttcacagttgattcagaagaaccctagtttcaagcctcctgtcgcttacaagccccca
aggccttgcaagaaactctacattcccgtaacagagtaccctgactacaattttattggt
cttataattggaccacggggaaatacgcagaaaagaatggagaaagagactggggcgaag
atcattatccgtggcaagggttctgtgaaggaaatcaagaatccgaaaaaccgtgacctg
aagtttgatttctcggagagtgaagatctgcatgtcttcatagaggcagaaactcagcaa
tcattggatgctgccgtcagtatggttgaaaagctgctcgttcctgtagaaggacttaat
gagcataagcgggcacagctgagggagcttgcggaactcaatggcatcgtcaaacacgat
ggtttctgcaggttacatggtggacctggacacgggcattcaacatccaaaactgacgct
atctgtcatacgtccggtgatttcggtcatccttcgatcggctgccctttgaaacgatca
gcaaaaagaaacagaatggccggcgaacattgtagctctgttcctgaacatagtcgtcgg
ggcagccgcggcagcctggtttgccaaacacgtccgggccatagtcctgcagctcctgct
gctgatgttgttgcatcgtggggaggcagttcagtgttggttaattcttctggctataat
atctcatcgcaggcatctggctttggctccacttcaatgccaatccacaaatataatgga
gtcgatggagcaaatctgtatgttggttatctgccccgagcaatagactgtgagcagtta
atgcatctgttctctccctttggcagggtacttgaagcaaaggttatcaaggataggaga
actggtttaagcaagggctatgggtttgtaatgtatgcagatgaggtaactgcattctgt
gctgccactcatatgaatggctacaggcttgatggaagatcgctggtcgttagacttgca
gcgcgagcaccaccaactggtgcggttggacatggcttgagttcaggggacactgaacaa
tctacatcccttttgctatccgcaccaaatgctgacccctttgcgtggtatggacctcct
attatgaagttgccttcttcgtattcaagctgtaacaacgccggaatgttgccatcatca
ggctacgttggcgctgtcgatccattcaggcgacggcaactttcttcttcttacggtgca
catgaaattccaaatgcatatgcagagaatgcttgtgtggcatggcgggagttcaaacct
tcctggtga
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