Nymphaea colorata (blue-petal water lily): 116265556
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Entry
116265556 CDS
T07418
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116265556
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncol01009
]
116265556
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116265556
03036 Chromosome and associated proteins [BR:
ncol03036
]
116265556
Protein phosphatases and associated proteins [BR:
ncol01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
116265556
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
116265556
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
116265556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF4187
Motif
Other DBs
NCBI-GeneID:
116265556
NCBI-ProteinID:
XP_031502096
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Position
12:complement(15495659..15506158)
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AA seq
540 aa
AA seq
DB search
MEVESVGDVASLDPDLLQLPELSTVALKSNLYMVDELFSQFLSIPETGRLVKSLLDDAKA
GISLSVSGTSSSSNSSPTNSLPSIFPAGSVPPLSPRSTSGSPRAAKRHAAGLSNLGSPLK
LVSEPVREFIPQFYFKNGRPPPSELKEQCLFKVNELFCGHYDGLHVQEFKPLTREVCKLP
SFFSSTIFKKIDVEGLGFITRDQFIDYWINSNILTMDFPTQIFRVLKQPGQNFLTQEDFK
PVLRELLATHPGLEFLQGTPEFQERYAETVIYRIFYYMNRSGNGHLTLRELKRGNLIAAM
QHVDDEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLVRYGNHALTYRIVDRI
FSQVSRKFKSNVEGKMGYEDFVYFMLAEEDKSSQPSLEYWFKCIDLDGNGVLTANEMQFF
YEEQLHRMECMAQEPVLFEDILCQMVDMICPENESCFTLKDLKRSKLSGNIFNILFNLNK
FMAFETRDPFLIRQEREDPTLTEWDRFAHREYIRLSMEEDGEDASNGSAEVWDESLEAPF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggaatcggtgggggatgtcgcgtcgctcgatcctgacttgctccagttgcca
gagctgtcgacggttgccctgaagtcgaacctttacatggtggatgagctcttctcccag
tttctctcgatcccggagactggtcgcttggtaaaatcattgctggatgatgcaaaggcg
ggtattagcttgagtgtctcaggcacttctagtagctcaaattcttctccaacaaattct
ttgccctcgatatttcctgctggcagtgtaccacctctttctccaagaagtacctctggt
tctccacgtgctgcaaagcgacatgcagctgggctatctaatctaggttctccactgaaa
ttggtcagtgagcctgtcagggaattcataccgcagttctatttcaagaatggacgacca
cctccaagtgaattgaaggaacagtgcctttttaaagtcaatgaactgttctgtggtcat
tatgatggactccatgttcaagaatttaaacctctgacaagggaggtgtgcaaactgccg
tcttttttttctagcaccatttttaaaaagattgatgttgaaggtctggggtttataaca
agggaccagtttattgattactggatcaatagtaatattttgacaatggattttcctacc
caaatttttagagttctgaagcaacctggtcagaattttcttactcaggaggacttcaag
ccagttcttcgagagcttttggccactcatccagggttagagtttcttcagggaacacct
gaatttcaagagagatatgctgaaactgtaatatacagaatattttactatatgaatcga
tctggtaatggtcatcttacattaagggagctgaagcgtgggaatctgattgctgcaatg
cagcacgttgatgatgaagaagatatcaacaaagtactgagatatttttcttatgaacat
ttctatgtgatatattgcaaattctgggagcttgacacagatcatgacttcttgatcgat
aaggagaatcttgttagatatggtaaccatgctctgacttacaggatcgtggataggata
ttttcacaggtttccagaaagttcaaaagtaatgttgaaggaaagatggggtatgaggac
tttgtgtacttcatgttggcagaagaggacaaatcttcccagcctagtcttgagtattgg
tttaagtgtatagatttggacggtaatggagtgctcaccgctaatgaaatgcagttcttt
tatgaggagcagctacaccgcatggagtgtatggcccaggaaccagttctttttgaggac
attttgtgccaaatggttgacatgatttgtcctgagaatgagagttgttttactctcaaa
gatctcaaacgtagcaagctttcgggcaatattttcaatatcctgttcaacctcaacaaa
tttatggcatttgaaactcgggacccatttcttatccgtcaggaaagggaggatccaaca
ttgaccgagtgggaccgttttgctcatcgagaatatatcagactgtccatggaagaagat
ggagaagatgcttctaatggaagtgcagaggtttgggatgaatcgcttgaggctccattt
tga
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