Nymphaea colorata (blue-petal water lily): 116265792
Help
Entry
116265792 CDS
T07418
Name
(RefSeq) syntaxin-52-like isoform X1
KO
K08503
syntaxin of plants SYP5
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116265792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116265792
Membrane trafficking [BR:
ncol04131
]
SNARE
SNAP-25[C] (Qc)
STX8
116265792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
SPAM
STX6_10_61_N
Use1
DUF2730
Consortin_C
ATG16
Motif
Other DBs
NCBI-GeneID:
116265792
NCBI-ProteinID:
XP_031502583
LinkDB
All DBs
Position
12:complement(16613284..16620914)
Genome browser
AA seq
247 aa
AA seq
DB search
MIVKLQIFDLLMCGTMASAADSWMRELNGASRIADEISAGISERSSFPASGPETQCHLSG
LRRKNTILKTRLDMLESLLAKLPTKQPITEKELHRRQDMLANLRSKANQMASTLNMSSFG
NRDNLLGPESKASEINRTAGLDNYGIVGLQRQIMREQDEGLGKLEETIVSTKHIALAVNE
ELTLHTRLIDDLDQHVDSTDSRLQRVQKRLAILNKRTKGGCSCMCLLLAVIVIVILAVVV
WLLIKYL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaaaattgcaaatttttgacttgctgatgtgtggcacaatggcttctgctgca
gactcttggatgagggagcttaatggagcatctaggattgcagatgagatcagtgctgga
atttctgagagaagttcattccctgcatcaggcccagaaacacaatgccatttgtctggc
cttcggaggaagaacacaatccttaagaccagacttgatatgttggagtcccttttggcg
aagcttcctacaaagcagccaataacagagaaggaacttcatcggcggcaagacatgctt
gcaaatctcagatccaaggccaaccaaatggcatccacattaaacatgtcaagcttcggc
aacagggacaacttgcttgggccagaaagtaaagcctctgagatcaatagaactgctggc
ttggataactatggtattgttggtctgcagcggcagattatgagagaacaagatgagggt
ctggggaagttggaagagacgattgtcagcacaaagcatattgctttggctgtcaacgag
gagctgactttgcacacacggctgattgatgacttggatcagcatgttgattcaactgat
tctcgtcttcagcgtgttcaaaagagattagcaattctcaacaagcgaacaaagggagga
tgctcttgtatgtgcctcttgctggcggtgatagtcattgtcattcttgcggttgttgtt
tggctgctaatcaagtatctctga
DBGET
integrated database retrieval system