Nymphaea colorata (blue-petal water lily): 116265886
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Entry
116265886 CDS
T07418
Name
(RefSeq) cell division cycle protein 48 homolog isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116265886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116265886
03009 Ribosome biogenesis [BR:
ncol03009
]
116265886
04131 Membrane trafficking [BR:
ncol04131
]
116265886
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncol04147
]
116265886
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116265886
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116265886
Membrane trafficking [BR:
ncol04131
]
SNARE
SNARE associated proteins
Others
116265886
Autophagy
Aggrephagy
Other aggrephagy associated proteins
116265886
Exosome [BR:
ncol04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116265886
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_33
AAA_22
AAA_2
TIP49
CDC48_2
AAA_14
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
IstB_IS21
ATPase_2
AAA_18
ABC_tran
Vps4_C
Parvo_NS1
Sigma54_activat
nSTAND_NTPase5
Zeta_toxin
NB-ARC
TsaE
AAA_7
NACHT
Bac_DnaA
AAA_24
DUF815
Rad17
SLFN-g3_helicase
NTPase_1
Motif
Other DBs
NCBI-GeneID:
116265886
NCBI-ProteinID:
XP_031502721
LinkDB
All DBs
Position
12:complement(10113454..10122253)
Genome browser
AA seq
815 aa
AA seq
DB search
MSHQPRSSNSRRARGQKDYSTAILEGKKALNRLVVDEASLNDNSIISLHPDTMDTLHILR
GDTVLIKGKRRRDTVCIALADEICDEPKIRMNKVVRSNLGVRLGDVVSVHPCPDINYGKR
IHVLPIEDTIEGVTGSLFDAFLKPYFWEAYRPVRKGDVFMVRGGMRSVEFKVMETDPSDS
CIVSPATEIFCDGPPVKREDVSGRLDEVGYDDVGGVRKQMAMIRELVELPLRHPQLFRSV
GVRPPKGILLYGPPGSGKTLIARAVANETGASFFCINGPEIMSKLAGESESNLRKAFRDA
ERAAPSVVFIDEIDSIAPKREKTQGDVERRIVSQLLTLMDGLKARAHVVVIGATNRPNSI
DSALRRFGRFDREIDIGVPDDAGRLEVLRIHTRNMKLSDDVDLERIARETHGHVGADLAA
LCTEAALQCIREKMDVIDLEDESIDAEILNAMAVTNDHFMTALATSYPSALRETQVVEVP
NISWDDIGGLQNVKRELQETVQYPVEHPEMFEKFGMSPSKGVLLYGPPGCGKTLLAKAIA
SECRSNFISVKGPELLTMWFGESEANVRGIFDKARQSAPCVLFFEELDSIATQRGRSVGD
AGGGADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDESS
RFQIFKACLRKSPVSEDVDIRALAQYTHGFSGADITEICQRACKYAIRETIEKDMERKKR
RAHEASEVMAEDVTEEVEEIKARHFEESMKYARRSVSDADIRKYKSFARTLQQSRGFGGE
FKFAAHRPQARAGANATDQFSAAGDDAAFDVDLLN
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccaacctcgttcctccaattcgaggagagcaagggggcagaaggactacagc
acagccatcctggaggggaagaaggcgctgaatagattggtggtagacgaggcctcccta
aatgacaattctatcatctctcttcacccggacaccatggacacgcttcatatcctccga
ggggacactgtcctcattaagggaaaaaggaggagagacactgtttgcattgctctggct
gacgagatctgcgatgagccaaagatccgaatgaacaaggttgttagatccaatctgggg
gtcaggcttggtgatgtggtgtcggtgcacccttgccccgatatcaattacggaaagcgg
atccatgtcttgcccatcgaagacacgatcgaaggcgtcaccggcagcctgtttgatgca
tttttgaagccctacttctgggaggcgtaccggccggtgaggaagggggacgtcttcatg
gtgagaggagggatgcggagcgtcgagttcaaggtcatggagaccgacccatctgactcc
tgcatcgtcagccccgccaccgagattttctgcgacggcccaccggtaaagcgggaggac
gtctccggccggctggacgaggtcgggtacgacgacgtgggcggcgtccggaagcagatg
gcgatgatcagggagctggtggagctgccgctgcgccacccgcagctcttcaggtccgtc
ggcgtgaggccgcccaaggggatcctgctgtacgggccgccgggctcgggcaagacgcta
atagcgagggcggtggcgaacgagacgggggcgtccttcttctgcataaacgggccggag
atcatgtcgaagttggcgggggagagcgagagcaacctgaggaaggcgttccgggacgcg
gagagagcggcgccgtcggtggtgttcatcgacgagatcgactcgatcgcgccgaagagg
gagaagacgcagggggatgtggagaggaggatcgtgtcgcagctgctgacactaatggac
gggctgaaggcgcgggcgcacgtcgtcgtcatcggcgccaccaaccggcccaacagcatc
gactcggcgctccggcggttcggccgcttcgacagggagatcgacataggcgtccccgac
gatgcaggaaggctcgaagtcctccgaatccacacccgcaacatgaagctctccgatgac
gtggatttggagaggatagcgagggagacgcatgggcacgtaggcgcggacctggcggcg
ctgtgcacggaggcggcgctgcagtgcatcagggagaagatggacgtgatcgacttggag
gacgagagcatcgacgccgagatcctcaacgccatggccgtcaccaatgaccacttcatg
actgcccttgccaccagctacccttctgccttgcgagagactcaggtcgtggaagtgccg
aacatcagctgggatgatattggtgggctgcaaaatgtcaagcgtgagcttcaagagacg
gtgcaataccctgtggagcacccggagatgttcgagaagtttggcatgtcgccttcaaag
ggagttcttctgtatgggccgccgggctgcgggaagacgctgctggccaaggccatcgcc
agcgagtgcaggtccaacttcatcagcgtgaaggggccggagctgctcaccatgtggttc
ggcgagagcgaggccaacgtccgcggcatcttcgacaaggcccgccagtccgccccctgt
gtcctcttctttgaggagctcgactccatcgctactcagagggggaggagtgtgggagat
gcaggtggtggagctgatagggtcctgaaccagctgctgacggagatggatgggatgtcg
gcgaagaagactgtcttcataatcggcgccaccaaccggccggacatcatcgatccggcg
ctgctcaggccggggcgcctcgaccagctgatctacatccctctgccggatgagagctcc
cgcttccaaatcttcaaggcctgcctgaggaagtcgcctgtgtctgaggacgttgatatc
agggcgctagcccagtacacacacgggttcagtggcgctgacattactgaaatatgccaa
agggcctgcaagtacgccattagagagaccattgagaaagacatggagagaaagaaaaga
agagctcatgaggcatcagaagttatggcagaagacgtcacagaagaggtcgaagagatc
aaagcacgtcattttgaagagtccatgaaatatgctcgcaggagtgttagcgatgccgac
atccggaagtataagtccttcgctcgtacattgcagcagtcaagaggattcggaggtgag
ttcaagtttgccgctcaccggccacaggctagggccggagctaatgccactgatcagttc
tcggcagccggagatgatgctgcctttgatgttgacttgctcaattga
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