Nymphaea colorata (blue-petal water lily): 116265918
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Entry
116265918 CDS
T07418
Name
(RefSeq) ATP-dependent helicase BRM
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116265918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116265918
03036 Chromosome and associated proteins [BR:
ncol03036
]
116265918
Transcription machinery [BR:
ncol03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116265918
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
116265918
Chromatin remodeling factors
BAF complex
116265918
PBAF complex
116265918
GBAF(ncBAF) complex
116265918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
AAA_22
BipA_C
AAA_14
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
116265918
NCBI-ProteinID:
XP_031502776
LinkDB
All DBs
Position
12:complement(1214569..1236727)
Genome browser
AA seq
2263 aa
AA seq
DB search
MQQGSQQGGGGAAPHGRNPPPCRSSSASPSPSSSSSAVSAPHLGFDSLQHPQFQQRQPLQ
QAHLRKPEGDDSLIAYQTGSNHGILGGSSFPSSSMMPFPQQSRKFIDISQQQNLSQVREE
NQVKVQSLEEQVQSPAHQAYLQYAFQNCQQKTTGNMQVQQQMKGGMIGPSSKDQEAHINN
MKMQELISIQAANQMQGSMFKKSNEHVVNTDRKLDQGQVSGDQRGDMKAPQAVIGQLTAG
NMMRPVQASQAQPSMQNMANNQLAILQLQAVQAWAMEHNVDLSLPSNANLVAQLLPIWQS
KIAAIQKANEGNTGSPQPRLPTNKLQGLPSPPVNDRPSMGNENSVHGSSVTEASVQAGPA
KAQPTFPGGSFPTSGTSKVVNSTNAQMLQTTSQSRENHVEKAGRHAVGNGVPIMQLTQTS
APTSQSMSQSIPEMQMQNLRQLQQLNRYPLQSVALNEGLRNVPSQTSSLNQTQRLGFTKQ
QLHVLKAQIMAFRRLKKGDGVLPQDILQSISPPPLNTQPLQTVYPASGTTQERNMAKGQA
DHGKNLLVSDKAQVVPPNRAQPVLKEETAAGEEKTTISSHSQGAIGSGSSQPVHVGVAKD
VHNTAIFAKPDREQDGESNRAPPKSDFTPDKGKSSHQHNVPSDNVQAKKITVPATTPAPK
DVNIVRKYSGPIFDSPYFTKKHDSFSSATSHVNNIHALSLGYDIKDLLLQERSEVDHKKR
SDNLKKIGCLLAVNLDRKRIRPDLILRLQIEEKKLRLLDLQARIREEVDQQQQEIMAMPD
RPYRKFVRQCERQRVEIMKQLQLSQRVAREKQLKTVFQWRKKLLEAHWAIRDARNARNRG
VAKYHERMLREFSKRKDEDRTKRMEALKNNDVDRYREMLLEQQTNTPGDAAQRYAVLSSF
LSQTEEYLHKLGGKIRAVKCNQEVEEASLAAAAAARAQGLSEEEVKAVANCAGKEVMIRN
RFSEMNARKDNKYYNLAHAVNERIIKQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILA
DEMGLGKTVQVMALMAYLMEFKGNYGPHLIIVPNAVMVNWKSELHNWLPSVSCIYYVGNK
DERMKLYTQEVCAMKFNALVTTYEFVMNDRSKLSKVEWKYIIIDEAQRMKNRNSRLARDL
DRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFYDWFSQPFQKDGQSQTAED
DWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVPVVLRCRMSAVQSAIYDWIKA
TGSKKADPQEELTRVSRNPNRQMRQYVPLQNRCMELHKVCNHPLLCYPFLTYYAKDYIVR
SCGKLWMLDRILIKLYKTGHRVLLFSTMTKLLDILEDYLQWRRLVYRRIDGTTSLEDRES
AIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDANPKNEEQAVARAHRIGQKR
EVRVIYMEAVVDTISSYQKEDDFRSGAAVDLEDDLAGKDRYIGSIESLVRNNIQQYKIDM
ADEVINAGRFDQRTTQEERRMTLELLLRDEERYQETVHDVPSLQEVNRMIARSEEEIELF
DRMDEELNWTGDMIKFDEVPKWLRASTREVNAVIASLSKKASKYGLIGNAVAEVEEDESR
ASPKVVRRRGRPKGSSNSKKLLAYQQLDDGEENDASSDDKNGYDEEEETGGFEDEDVSRE
LGDPMNNKDLYEEDLQTEYDGEEATRNDRTLEEAVSSGSSSESCKVTQDMTATISCQKFG
SLSALDARPGSVSKCVPVELEEGEIAVDSNMDVQQSGSWIHDRDDYEDEQALQPKIKRKR
SIRLRPRGSAEKVDDKSSGDKAFLHQGNSSQLTNHATHTFESPLRADLEVETLNDSMSGK
NDIIELSYRQRSQLASKRGAHSSNSQLSKNPKINSFTGADDPAENSKGIWEKASHTSSPP
FIGKQMSDINQRKCKNVFAKLQRTIDKEGHLFAPILTDILKRSESSVSVRGSVYMPDMRK
IEQRLDKSEYGTIMEFVADVQFMLNNAIQCCGYPHEAKSDARKILDLFFSSMKAAFPDID
FREARSLASFTGPGASVSPSPRPISQGAGSSASPSPRQISQGPGASSCASPRRVGQGRMQ
KPLDDLNHDHGSRLGHMSLSADDHILDRALTSKLHKESRNGSSSRERGISDDVDILTHPG
DLVVCKKKRKDRDKSAIKARMVQVASPPDASRPVRLAVQKDASPVSPPPPQQARRVHGWL
QSPSPSSGNGAGKSSESGVKEAQWARPVKRLRTDAGKRRPSHI
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagggctcccagcagggcggcggcggcgccgctcctcacggtcggaatccgccg
ccctgtcgctcgtcatcggcatctccatcgccttcgtcgtcgtcgtcagcagtctctgcc
ccacatctcgggtttgactcgcttcagcatccacagttccagcagcggcagcctttgcaa
caggcacatctcagaaagcctgaaggagatgactctctcatagcttatcagacaggaagt
aaccatggcattttggggggtagcagctttccttcatctagcatgatgccttttcctcaa
caatctaggaagttcattgatatatctcaacagcaaaatctttcccaggttcgggaagaa
aatcaggttaaagttcagagcttagaagagcaggtgcaaagtccggctcatcaagcttat
ctccaatatgctttccagaattgtcaacagaaaactacaggaaatatgcaggtgcaacaa
cagatgaaaggtgggatgattggcccgtcctctaaggatcaggaagcacacataaacaat
atgaaaatgcaggagctaatttccattcaggctgccaatcagatgcaaggatccatgttt
aaaaagtctaacgagcatgttgttaatactgataggaagttggatcaaggacaggttagt
ggtgatcagcggggtgatatgaaagccccacaagctgtcataggacaattaacagcagga
aatatgatgaggcctgtgcaggcatcacaggctcaaccaagtatgcagaatatggcaaat
aaccagttggcgatccttcagttacaagctgttcaggcttgggcgatggagcataatgtt
gacctctcccttccatcgaatgccaaccttgttgcacaacttttacccatttggcagtca
aagattgctgcaattcagaaagcaaatgaaggcaataccggatcaccacagccacgtttg
cccacaaataagctgcaagggttgccttctccccctgtcaatgatcgtccaagcatggga
aatgaaaactctgttcatgggagctctgttacggaagcgtctgttcaagctgggcctgca
aaagctcagccgacatttcctggaggttcttttccaacttctggtacttccaaagttgtg
aacagcaccaatgctcaaatgcttcagactacatcccagagcagagagaatcatgttgaa
aaggctggtagacatgcagttgggaatggcgtgccaatcatgcagttgacacagacatca
gcacctacaagccaaagcatgagtcaatccattcctgaaatgcaaatgcaaaacttaagg
cagttgcaacaattgaatcgctaccctttgcagtcggtggcattgaatgaggggcttcgc
aatgtcccatctcagacttcttctttaaaccaaactcaaaggttggggttcactaagcag
cagcttcatgtccttaaagctcaaataatggcctttaggcgtctcaagaaaggggatggc
gtccttcctcaggatattcttcaaagcatttcacctcctccactgaatacacagccatta
cagacagtatatccagcatctggcaccacacaagaaagaaacatggcaaagggtcaggca
gatcatggcaagaacttactggttagtgataaagcacaagttgtgcctcctaatagagca
caacctgttctaaaggaggaaactgcggcaggtgaggagaaaacaactattagcagtcat
tcacaaggtgcaataggtagtggctctagccagccagtgcatgtgggggtggcaaaagat
gtgcataacactgccatctttgcgaagccagatcgtgagcaggatggagaaagcaataga
gcccctcctaaaagcgattttactccagacaagggcaagagttctcaccagcataatgtt
ccgtccgacaatgtgcaagctaaaaaaattacagttccagccaccacaccagcaccaaaa
gatgtcaacattgtcagaaagtacagtggccccatttttgattctccatatttcaccaag
aagcatgattctttcagctcagcaacaagtcatgtgaacaacatacatgcattgtcatta
gggtatgatataaaggatttgctattacaggaaagaagtgaggtcgatcacaagaaaaga
tccgacaatctaaaaaagattggctgcttgttagctgtgaatttggataggaagcggata
agacctgatcttattttacgtctccaaattgaggaaaagaaacttcgtctattagatctc
caggcacgtataagagaagaggttgatcagcaacaacaggagatcatggctatgccagac
agaccttatcgaaagtttgtgcgtcaatgcgagcgtcaaagggtggagatcatgaagcaa
ttacaactgtctcaaagggttgcaagagaaaagcaattgaaaactgtattccagtggcgc
aaaaagcttcttgaagctcactgggctattcgtgatgcacggaatgctcgtaaccgtgga
gtagctaaatatcatgagagaatgctaagagagttctcaaagaggaaagatgaggaccgt
accaagagaatggaggctttgaaaaacaatgatgtggataggtatcgtgagatgttgtta
gagcaacaaaccaatacgcctggagatgctgctcagcggtatgctgttctgtcatcattc
ttgtctcagacagaagagtaccttcataagctgggaggaaaaataagagctgtcaagtgt
aaccaagaagtagaagaggcttcacttgctgcagctgcagctgcaagggcacagggtctt
tctgaagaagaggtgaaagcagtagctaactgtgctggaaaagaagtgatgatcaggaat
aggttctctgaaatgaatgcacggaaggataacaagtactacaatcttgctcatgcagtg
aatgaaaggataattaagcagccttcactgttgcgggctgggacgctgcgagactatcag
cttgttgggcttcagtggatgctttctttgtacaacaataagctaaatggcattttggct
gatgaaatgggtcttgggaagacggtgcaggtgatggccttaatggcttatttgatggag
ttcaaggggaactatggaccacatctcataattgtgccaaatgctgttatggttaattgg
aagagtgagctacacaattggctaccatcagtttcttgcatatattatgttggcaataaa
gatgaacgaatgaaattatacactcaggaggtttgtgcaatgaagttcaatgcgcttgtc
acaacttatgagttcgtcatgaatgatcgctcaaaactttccaaagttgaatggaaatat
ataatcattgatgaggctcagcgcatgaaaaacagaaattctcgcttggcacgtgatctt
gataggtatcgctgtcagagacggttgcttttaacaggaacaccactacagaatgattta
aaggagctttggtcgcttctaaacttgctcctgccagaggtgttcgataatcgcaaagca
ttttatgactggttctctcaaccatttcaaaaggatggacaatcacaaactgcagaagat
gactggttggaaacagagaaaaaagttattatcattcaccggcttcatcaaattttggaa
ccatttatgctcagacgacgtgttgaagatgtggaagggtcacttccaccaaaggttccg
gttgttctgagatgtagaatgtcagctgttcaaagtgctatctatgactggattaaagct
actggaagtaaaaaagctgacccgcaagaagagttgacaagagtttcaaggaacccaaat
cgtcaaatgaggcaatatgttcctcttcagaacagatgcatggagttgcacaaagtatgc
aatcatccattattatgttatccttttttgacctattatgccaaggattacattgtaaga
tcatgtggcaagctgtggatgctcgataggattcttataaagctttacaaaacagggcat
cgtgtgcttctgtttagtacaatgacaaagctccttgacatactagaggattatttgcaa
tggcgacgactagtttacaggcgaattgatgggacaactagcctggaggatcgagaatct
gctattgtggacttcaatagtcctgattcagactgctttatctttcttctcagcattcgt
gcggcagggagaggcttaaatcttcaatctgctgatacagttgtcatctatgaccctgat
gcaaatcctaaaaatgaagaacaagctgtggctagggctcatcgcattggtcagaagaga
gaagtgcgagttatatatatggaagcagttgttgatactataagtagttaccagaaggaa
gacgactttaggagtggggctgcagtggatctagaggatgaccttgctggaaaagatcgc
tatataggttcaatagaaagtcttgtccgcaataatattcagcaatacaagattgatatg
gcagatgaggtcataaatgcagggcgttttgatcaaaggactacgcaggaagaaagacgc
atgacactggagttgctactgcgtgacgaagaaagatatcaagaaactgttcatgatgta
ccttcactacaggaggttaatcgtatgattgctcgaagtgaagaagaaattgagctgttt
gatcggatggacgaggagctaaattggacgggcgatatgataaaatttgatgaagttcca
aaatggcttcgtgcctctactagagaggtaaatgctgttattgcatctctttcaaaaaaa
gcatccaaatatggcttgattggcaatgcggttgcagaagtggaggaagatgaatctcgt
gcttctcctaaggttgtcagaagaagagggcggccaaagggatcatcgaattctaagaag
ttgcttgcttatcaacaacttgatgatggggaagaaaatgatgcaagttcagatgataaa
aatggatatgatgaagaggaagaaactggaggatttgaagatgaagatgtcagcagagaa
ttaggtgatccaatgaataataaagacctgtatgaagaggatctgcaaactgaatatgat
ggggaagaggccacaagaaatgacaggaccttggaagaagcagtttcatctggatcttct
tctgaaagctgtaaagtgactcaggatatgactgcgaccatttcttgtcagaaattcggc
tctctttctgcattagatgcaagacctggatcagtatccaagtgtgtgcctgtagagtta
gaagaaggtgaaattgcagtggattccaacatggatgtccaacaatctgggagctggatt
catgaccgagatgattatgaagatgagcaggctttacagcctaaaattaagaggaagcgc
agcatccggcttcggcctcgaggttctgcagaaaaagttgatgacaaatcctccggagac
aaggcatttctccatcaaggaaattcatctcaattgacaaatcacgcaacacatactttt
gaatcaccattaagggctgatctagaggttgaaaccttgaatgattccatgtctggaaag
aatgatatcattgaattgagctataggcagcggtcacagcttgcctcaaaaagaggtgca
cattcttcgaactcgcagttgtcaaagaaccctaaaatcaacagttttacaggagcagat
gaccctgcagaaaactccaaaggaatttgggaaaaggcatctcatacaagtagtcctcct
tttattggcaaacagatgtctgatatcaaccaaagaaagtgcaagaatgtatttgccaag
ctacaaagaacaatagacaaagagggtcatttatttgcaccaatattaactgatatcctg
aagagaagtgaaagttctgtttctgtacgtggttcagtttatatgcctgatatgcgaaaa
attgaacagcgcttggacaaatctgagtatggtactataatggaatttgtggcagacgtc
cagtttatgcttaacaatgccattcaatgttgcggttatccacatgaggcaaaatctgat
gcgaggaaaatactcgacctcttcttcagttccatgaaagctgcttttccagacattgat
ttcagagaagctagaagcctggcttcattcactggtccaggtgcttctgtttctccatct
cccaggccgataagccaaggtgcaggctcttctgcttctccatctcccagacagatcagt
caaggcccaggagcttcttcatgtgcatctccaagaagggtcggccaaggtaggatgcag
aagcctttggatgacctgaatcatgatcatggttccaggctgggacacatgtccctctct
gctgatgaccacatactagacagagcacttacatctaagcttcataaggaatccaggaat
ggaagcagcagtagggagaggggcatttccgatgatgtagacatattgactcatccaggg
gacctggtcgtctgtaagaaaaagaggaaagacagggataagtcggccattaaagccagg
atggttcaagtagcttcgccacctgatgcaagtcgtcctgtcagacttgcggtacagaag
gatgcctctcctgtgtcaccccctcctccccagcaggctcggcgggtccatgggtggctt
cagtctccatcccctagttctggaaatggtgctgggaagagcagtgaatctggagttaag
gaagcacagtgggcacggcctgtgaagagactgagaacagatgctggtaaaagaagaccc
agccatatatga
DBGET
integrated database retrieval system
