Nymphaea colorata (blue-petal water lily): 116265940
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Entry
116265940 CDS
T07418
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00040
Pentose and glucuronate interconversions
ncol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116265940
Enzymes [BR:
ncol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116265940
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF2551
Motif
Other DBs
NCBI-GeneID:
116265940
NCBI-ProteinID:
XP_031502809
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Position
12:18484243..18492575
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AA seq
443 aa
AA seq
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MAEKAGVLTVVALIMVALAIGGLSGVRGSREETDLRGVNAEAYEAERRLQAIRSNTSFIN
PVVDDPDAVAEMVTMSIRNSTARRQLGYLSCGTGNPIDDCWRCDPNWSRNRKRLADCGIG
FGRNAVGGRNGRFYVVTDHTDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVIVLKEELIM
NSFKTIDGRGANVHIANGACITIQFVTNIIIHGIHIHDCKPTGNAMVRSSPRHYGWRTMA
DGDAVSIFGSSHIWVDHCSLSKCADGLVDAVMASTAITISNNYFTHHNEVMLLGHSDSYM
KDKEMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRY
LAPVNPFAKEVTKRVNTATGVWKNWNWRSEGDLMLNGAYFTSSGVGAAASYSRASSLSAK
SSSMVGIITSQAGVLSCRKGSSC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaagctggagtcctgactgtcgtggccttgattatggtggcgctggccatc
ggagggctctccggcgtccgagggagcagagaggagacggatctgagaggagttaatgct
gaagcgtatgaagcggaaagaaggctgcaagcaatcagatctaacacgtctttcattaat
ccggtcgtggacgacccagatgccgtcgcagagatggtcaccatgagcattaggaacagc
acggcacggaggcaactaggctacctctcctgcggcaccggtaatcccatcgatgactgc
tggaggtgcgaccccaactggtcgcgcaaccgtaagaggctggcggactgcggcattggg
ttcgggcggaacgccgtagggggacgcaatggccggttctacgtggtgacggaccacacg
gacgatgacccagtgaacccccggccgggcaccctccgccacgcagtgatccaggacgaa
cccctgtggatcgtgttcaagcgagacatggtgatcgtactcaaggaggagctcatcatg
aacagcttcaagaccatcgacggtcgtggcgccaatgtccacatcgcgaacggcgcttgc
atcaccatccaattcgttaccaacatcatcatccacggcatacacatccatgactgcaag
ccgacgggcaatgccatggtgaggagctcgccgcgccactacggctggcggaccatggcc
gatggggatgccgtgtctattttcgggtctagccacatctgggtggaccactgctcgctc
tccaagtgcgccgacggcctcgttgacgccgtgatggcctccaccgccatcaccatctct
aataattacttcacgcaccacaacgaggtgatgctgttggggcatagtgattcttatatg
aaggataaggaaatgcaggtgaccatcgctttcaatcatttcggtgaaggtctcattcag
agaatgcccaggtgcaggcatgggtatttccacgttgtgaacaatgactacacccactgg
gagatgtacgcgattggaggaagtgcgtcccccaccatcaatagccaggggaaccgatac
ttggctcctgtcaacccattcgccaaggaggtgacgaagagagtgaacacggctacaggc
gtgtggaagaactggaactggaggtcggagggcgatctcatgctgaacggggcctacttc
acctcgtcgggcgtcggcgccgctgccagctactcgagggcctctagcctgagcgccaag
tcgtcctccatggtgggaatcatcacgtcccaggcaggggtgctttcctgccggaagggc
tccagttgctga
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