KEGG   Nymphaea colorata (blue-petal water lily): 116266165
Entry
116266165         CDS       T07418                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
ncol  Nymphaea colorata (blue-petal water lily)
Pathway
ncol03030  DNA replication
ncol03410  Base excision repair
ncol03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ncol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116266165
   03410 Base excision repair
    116266165
   03420 Nucleotide excision repair
    116266165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ncol03032]
    116266165
   03400 DNA repair and recombination proteins [BR:ncol03400]
    116266165
Enzymes [BR:ncol01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     116266165
DNA replication proteins [BR:ncol03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    116266165
DNA repair and recombination proteins [BR:ncol03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      116266165
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 116266165
NCBI-ProteinID: XP_031503132
LinkDB
Position
12:16021103..16054718
AA seq 2231 aa
MNGEGRRRERASARSQARSKLLRNAEEELEAKLGFDLFSEGETRLGWLLSFSSSSLENQD
SGKTYSCVDLYFVSQDGSTFKSKYRFSPYFYAATKETSELDVEAHLRRRYEGKISNIEIV
EKEDLDLKNHLSGLHKQYLKISFDTVQQLIHVKNDLLHVVERNQSKIEAAEAYGSLFTWN
RHDKQRVHDFLDYIIDLREYDVPYHVRFAIDNDVRCGQWYNVSVTSTGVILEKRADLLQR
AEVHVCAFDIETTKLPLKFPDSEYDLIMMISYMMDGQGYLIINRECVGKDIEDLEYTPKP
EFEGHFKVKNAKNERELLMVWFGHMQEVKPHVYVTYNGDFFDWPFIESRAAYHGIKMSDE
IGFQCDANQGECRSKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMV
RFAIEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLL
MVQAYKANVICPNKHQTDPEKFHNNRLLESETYIGGHVECLESGVFRSDLPTKFQLDPSA
FERLLANLDRDLQYAIKVEGKMELDLVANYQDVKESIAVKLAMLRDEPNREECPLIYHLD
VAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRHLEWVWRGETFMSKKSEYYHL
KSQIESELVDDVDGEPSKSFLDLPKLQQQLKLKDRLKKYCQKVYKRVVDKPITERRVAGI
CMRENPFYVDTVRSFRDRRYEYKGLNKTWKGKLAEAKAKGNLMQIQEAQDMVILYDSLQL
AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWC
ALPGSFPENFTFVTKNSKKFTISYPCVMLNVDVAINNTNDQYQTLVDPVNKVYTTHSECS
IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE
VFDKFLHGSTLEECYAAVSSVANRWLDLLDNQGIDIADSELLDYISESSTMSKSLVDYGE
QKSCALTTAKRLADFLGDTMVKDKGLRCQYIVACEPQGTPVSERAIPVAIFETDAEIMKF
YVRKWCKISSDVGIRSIIDWSYYRQRLSSAIQKIITIPAAMQKVSNPVPRVMHPDWLHKR
VQEKEDKFRQRNITDMFNSSTHRNLPVPHSNHLSDQENLIDLEDMVVMDNVSLTGGQRLI
HGCQKNRGHKISPQTVVSSACEKEDGGTSMAPQVLMELHQNGRSMESIDRNIDYHGWLEI
KKRKWKETREGKKRQRLGAALKHPAPTTSASKSPFAIRNHKLDKRANGLVAYFRNREAAL
LRSHWQIIQLVPSPDLGNFFAWVVVEDIMFKVPLNVPRVFYLNTRAPITEEFPGKRVNKT
LPHARPSFNLIEVVVGEDQYKNESKKLAAHMADPEVEGLYETKMPLEYSAILRIGCVCKL
IQGANSRGLEDGWSLDELLMKTTTECSYLEHQMPFFYLYHSMSEGRGIFVIYIPASSSIS
VVVLNPYQNKELSMTLLEKQFREACQVLSVGPNLQSSGIFVKVDYVVSIKDAGKLLQRIL
NEYRHQHHGPAISVIECPKVQDLKFLIPTLDDFPCVTIPCNARDSQYQALGWQVVAAKTA
MQRCAASSQWLNERISLARYAHVPLGNFEHDWLLFTADIFYSRALHDAQQVLWISDCGIP
DLGGLFEEDASFIDEIQQLVITYPGAYRKVTVELKIHHLAVNSLLKSSQLDEIEGGMLLG
HEPDMPTGPPFVYSSSCFDEIAACSSAFRVLKHLIQRCLSDAVTSGNVFADAILQHLYRW
ICSPQSKLHDPTLHRVLQKIMQKVFSLLLAEFRKLGAVVIFADFSKIIIDTGKTDILAAQ
GYCECLLKALQSRDLFEWIELEPVRFWHSLLFMDQYNYGGILAKVLSGCSSNIQQASGSG
VLNDTHLDIVSSWNIAEYLPKKIQDSFLLIVSEFIYIPWKYAKEQSAIRSASREDSFSTP
SVTVAVARTQESDVTEFLKEQIGSYFTDKLLRIVNDIMCHPKAQNFSGDDKPSVYKLPHL
GGSHMHMCDAALELIKHISAVFVLDQHVQHDVLVMRKNLLRLIRVREFAPEAHFCDPCLS
FTLPNVICSYCNDCRDLDLCRDVSLLENDWYCAVQQCGQPYNREVMENALLQIVRQRERL
YHLQDLECTKCRKVKNAHLADQCGECAGSFQCRENANDFLMKMQVFLNVAIRQKFRLLED
CTAWILSLRKK
NT seq 6696 nt   +upstreamnt  +downstreamnt
atgaacggggaaggccgaagaagggagcgtgcgtcggccagaagccaagcgagatcgaag
ctgttgcgcaatgccgaggaggaactggaggcgaaactagggtttgatttgttctccgaa
ggggaaacgagacttggttggctgctttctttctcgtcttcgtcattggaaaatcaagat
agtggtaaaacgtacagctgtgtggatctttactttgtttcacaggatggatctactttc
aaatccaaatacaggttttctccttatttttatgctgcaacaaaggagacatctgaattg
gatgttgaagcacacctgaggagacgctatgaaggaaaaatatcaaatatcgagattgta
gagaaggaggaccttgatttgaaaaatcatttgtctggcttacacaagcagtatttaaag
atcagttttgacacagtgcaacaattgattcatgtgaaaaatgatttattgcatgttgtt
gaaagaaaccagtcaaagattgaagcagcagaagcttatggatcattgttcacttggaat
aggcatgacaagcaaagggtacatgactttttggattatattattgatcttagagaatat
gatgttccttatcatgtgcgtttcgcaattgacaatgatgtgaggtgtgggcagtggtac
aatgttagtgttaccagtactggtgtcattctagagaaacgggctgatcttctccagcgt
gccgaagtccatgtctgtgcatttgatattgagacaaccaagcttcctttgaagtttcct
gattctgaatatgacctgattatgatgatctcttacatgatggatggtcagggttatttg
ataattaatagagagtgtgtgggaaaggacattgaagatttggagtatacaccaaagcca
gaatttgaaggtcattttaaagttaagaatgccaaaaatgagagggaattactgatggta
tggtttggtcacatgcaagaagtgaagcctcatgtctacgttacctataatggcgacttc
tttgattggccattcattgaaagtcgggctgcatatcatgggatcaaaatgagtgatgag
ataggatttcaatgtgatgctaaccagggagagtgccgatcaaaatttgcttgccacctg
gattgttttgcatgggtgaaaagggacagttaccttcctcaaggaagccatggtctaaag
gcagttacaaaagctaaattaggctatgatccattggaggtgaatccagaagatatggtt
cgctttgccatagaacaaccacagacaatggcatcatattctgtctcagatgctgtcgcc
acatactacctgtatatgacatatgttcatcctttcatattctcactcgcaactataata
cctatgtcacctgatgaggtgctgagaaaaggaagtggtacactatgcgaaatgctcctt
atggtccaggcatataaggcaaatgtgatatgtccaaacaagcaccagacagatccagaa
aagttccacaacaataggcttttggagagtgaaacatacattggaggacatgttgaatgc
cttgaaagtggtgttttccgatctgatcttccaactaagtttcagcttgatccttctgct
tttgaacgattacttgccaaccttgaccgagatctacaatatgccataaaagtagagggc
aagatggagttagatttagttgctaactatcaagatgtgaaggaatctattgccgtaaag
cttgcaatgttgcgtgatgagccaaaccgtgaggaatgtccccttatatatcatcttgat
gtggctgccatgtacccaaacatcattctaaccaatcggcttcagccgccatcaatagtt
acagatgaagtttgtacagcatgtgatttcaatcgacctggcaaaacttgccttagacat
cttgagtgggtttggcgaggagagacgttcatgtccaagaaaagtgaatactaccatctg
aaaagtcaaattgagtcagagcttgtagatgatgtagatggtgaaccatcaaaatcattc
cttgacctcccaaaattgcagcagcagttgaagctgaaggatcgtttgaagaagtattgc
caaaaggtatacaaaagggtggttgataaacctattactgaacgtcgagttgctgggata
tgcatgcgtgaaaatccattttatgttgacactgtaagaagctttcgagatagaagatat
gaatacaaaggtctcaataaaacttggaagggaaaattagctgaagcaaaggctaaggga
aacttgatgcagatacaagaagcacaagatatggtgatactgtacgattctcttcagttg
gctcataagtgtatacttaattccttctatggatatgttatgcgcaagggagctagatgg
tattctatggagatggccggagttgttacctacacgggagctaaaattattcagaatgct
cgcttgctggtagaaaaaattggaagaccacttgaattggatacagatggcatatggtgt
gcactgccaggatcattccctgagaacttcacatttgttacaaaaaattcaaagaagttc
acaatttcttatccatgcgtgatgctgaatgttgatgttgcaataaacaatacaaatgac
caataccagacacttgtcgatcctgtcaacaaagtatacactacccatagtgaatgttca
attgaatttgaagtagatggaccatataaggctatgatactacccgcttcaaaggaagaa
gggatattaattaagaaaaggtatgctgttttcaatgatgatggaactcttgcggagctt
aaaggctttgagattaagcgacggggagaattgaagctcatcaaagtcttccaggctgag
gttttcgacaagttccttcacgggtcaaccttagaagagtgctatgctgcagtttcatct
gttgcaaaccgctggcttgatcttttagataatcaagggatagatattgctgatagcgag
ctgcttgattatatatctgaatccagcaccatgagcaaatccttggtggactatggagag
cagaaatcatgtgccctgacgactgcaaaacgacttgcagattttctaggggataccatg
gtcaaagacaaaggtcttaggtgtcaatatatagttgcttgtgagccacagggcactcca
gtcagtgaacgtgctatccccgttgcgatatttgagactgatgctgagattatgaaattt
tacgtgaggaaatggtgcaagatctcatcagatgtgggtatcagatctataattgattgg
tcctattacaggcaacggcttagttcagctatccagaagatcatcactatacctgcggca
atgcaaaaggtctctaatcctgttccaagagtgatgcatcctgactggttgcacaaaagg
gttcaagaaaaagaagataaatttcgacagaggaatataactgacatgttcaattcatca
acacatcgcaatctccctgtacctcattccaaccatctatcagatcaagaaaatcttatt
gacttggaggacatggttgtcatggacaatgtttccttaacaggagggcaaaggttgatt
catggttgtcaaaaaaataggggacataaaatttctccacaaactgttgtttcttctgct
tgtgagaaggaggatggaggcactagcatggcaccccaagtattgatggaattgcatcaa
aatggcagatcaatggaaagcattgataggaacattgattaccatgggtggcttgaaata
aagaagcggaaatggaaagaaacacgtgaaggaaaaaagagacagaggttaggtgctgct
ctgaaacatcctgccccaacaactagtgcaagcaagtcaccttttgctataagaaatcat
aagctggataagcgtgcaaatggacttgttgcttacttcaggaatcgagaagcagcacta
ttgcgttcacattggcagataatacaacttgtaccaagtccagatcttgggaattttttt
gcttgggtggtcgtagaagacataatgtttaaggttccacttaatgttcctagagtattt
tacctcaacacaagggcacctatcactgaagaatttccagggaagcgtgttaataagact
cttccacatgcccgtcctagctttaatctcattgaggtggttgttggtgaagaccagtac
aagaatgaaagcaagaagcttgcagctcatatggctgatccagaagttgagggattgtat
gagacaaagatgcctttagaatatagtgctattctacggattggttgtgtatgcaagttg
atccagggtgccaacagtcgaggccttgaggatggatggagtcttgatgaactgctgatg
aagaccactactgaatgttcctatttagaacatcaaatgccattcttttacttgtatcat
agcatgtcagaaggaaggggcatctttgtgatttacatccctgcatctagctctatatct
gtggtggtactaaatccctaccagaacaaggaattgtcgatgactctgctggaaaagcag
ttccgagaagcttgccaagttctttctgtgggtccaaatcttcaatcgagtggaatcttc
gttaaggtggactatgtggtatctatcaaagatgcaggaaaactactgcagagaatttta
aatgagtatcggcatcagcatcatggccctgctatcagtgtcattgaatgtccaaaagtt
caggatctaaagtttctgatacctactcttgatgatttcccatgtgttactattccatgc
aatgctcgagacagtcagtatcaggctcttggttggcaggttgtggctgcaaaaactgcg
atgcagcgatgtgctgcatcgtctcaatggctcaatgagcggatttctctcgctagatat
gcacatgtacctttgggcaatttcgaacatgattggcttctatttactgcagacatcttt
tattctagggctttgcatgatgcacagcaggttctttggatatctgactgtggtattcca
gaccttggaggcctatttgaggaagatgctagtttcatagatgagatccagcagttggtt
atcacatatcctggggcctacagaaaagtgacggttgagttgaagattcatcaccttgct
gttaattctcttctcaagagcagtcagcttgatgaaattgaaggaggcatgttattagga
catgagccagatatgcctactggaccccctttcgtatatagttcatcttgttttgatgag
attgctgcatgctcttctgcctttcgtgttctgaagcatttgatacagagatgcctttca
gatgctgttacatctggcaatgtgtttgctgatgcaatactgcagcatctttaccgctgg
atttgcagtccgcagtcaaaactccatgatcctaccttgcatcgtgtcctacagaagatt
atgcagaaggtgttttcactcctattagctgagttccgcaaactaggtgcagttgtaatc
tttgctgatttctcaaagatcatcatagatacagggaaaacagatatcttggcagctcaa
ggatattgtgaatgcttattaaaagcattacagtctagagatctttttgaatggattgag
ctcgagccagtccgtttttggcattccttgctcttcatggatcagtacaattatggaggg
attttagctaaggttcttagcggatgtagttccaacatacaacaggcatctggttcggga
gttctgaatgatacacatctggacattgtctcaagctggaatattgctgaatatctgcca
aagaaaattcaggattcgttccttttgattgtctctgagtttatctatataccatggaaa
tatgcgaaggagcaatcagcaattagatcagcttcaagagaagatagtttctccacacct
tcagtcacagttgcagttgctcgaacacaggagtctgatgttactgaatttctaaaagaa
cagattggatcttacttcacagataagcttttgaggattgttaatgatattatgtgccat
cctaaagcacagaatttcagtggggatgataaaccttctgtttacaaactccctcatcta
ggtggctctcatatgcatatgtgtgatgctgcattggagttgattaaacacatttctgct
gtttttgtgcttgaccaacatgttcaacatgatgtcctggtcatgaggaaaaaccttcta
agattgatacgtgtgagggagtttgctccagaggcacacttttgtgatccatgtttatcc
tttacattaccaaatgtgatctgcagctactgcaatgattgcagagatcttgatttatgt
cgtgacgtgtcactgcttgagaatgattggtattgtgcggtgcaacaatgtggccaacct
tataatcgggaagtgatggaaaacgcgcttctccagattgttcgacaaagagaacgactc
taccacttacaagatcttgaatgtaccaaatgtcgcaaggtgaaaaatgctcatctagca
gaccagtgtggtgaatgtgcaggatcattccagtgcagagaaaatgccaatgacttcttg
atgaaaatgcaagtttttctgaatgttgccattcgccagaaattccggcttcttgaagat
tgtactgcttggattttaagcttaaggaaaaagtga

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