Nymphaea colorata (blue-petal water lily): 116266644
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Entry
116266644 CDS
T07418
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03430
Mismatch repair
ncol03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116266644
03460 Fanconi anemia pathway
116266644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116266644
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
116266644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
116266644
NCBI-ProteinID:
XP_031503808
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Position
13:12370165..12403832
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AA seq
723 aa
AA seq
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MEASPPDISPERSPTAAPRIHRLEESVINRIAAGEVIQRPVSAVKELVENSLDAGSTSIN
VVVKDGGLKLIQVSDNGHGIRFEDLPILCERHTTSKLSAFEDLQTIKSMGFRGEALASMT
YVAHVTVTTITEGELHGYRVSYRDGVMEHEPRPCAAVKGTQVMVENLFYNMSARRKTLQS
SNDDYSKIVDLISRFAVHHKNVSFSCRKHGVNKADVHTVGSNSTMAAIRAVYGLSISRDL
VDVTASENDPSQSVFDMKGFISNANYNAKKTTMVLFINERLVECTPLKRAIEVVYAATVP
KAAKPFVYMSIVLPPEHIDVNVHPTKREVSLLNQEYIVDAIQNAVQSKMISSNTERTFHI
QTLLPGASSLLNAHKSTEQNSSPGTQSQKVPVNKMVRVDSLDPAGRMHAYLQDKSIGKCD
SKTDLASVRSAVRQRRNPKESADLTSIQELLSDVDSNTHAGLLEIVKHCTYIGMADDFLA
LLQYNTRLYLMNVVNISKELMYQQVMRRFAHFNAIQLSNPAPLPQLMLMELEDQELASAC
QESDGEKDKIVKMNTELLKQKSEMLMEYFCLEIDQAGNLSKLPVIIDQYTPDMDRLPQFV
WRLSNDVDWDDERNCFQSVAAVLADFYAMHPPLLPNPSGEGLQFYKKNLERSGQDDCLSS
EDVINEELVGVAETAWSQREWTIQHVLFPSMRLFLKPNNQMATDGTFVQIATLEKLYRVF
ERC
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggaggcatcaccgccggacatatctcctgagaggtctccgacggcggccccgagaata
catcgcttggaggaatccgtcatcaataggatcgccgctggagaggtgatccaacgcccg
gtgtcagccgtgaaggagctcgtggagaatagtctcgacgccggatcgacgtccatcaat
gttgttgtcaaggatggtggcctgaagctcatccaagtttcagataatggacacggtatt
cggtttgaagacctgccaatactttgtgaaagacacaccacatcaaagctaagtgcattt
gaagaccttcaaactataaagtcaatggggtttagaggagaggcattggccagcatgaca
tatgttgctcatgttacagttacaacaataactgaaggtgaattgcatggatatagggta
tcatatagagatggagtgatggagcatgagcctcgaccatgtgctgcagtgaaaggaacc
caagtcatggttgaaaatcttttttataacatgtcagctcgaaggaaaacattgcagagt
tctaatgatgactattccaaaattgtggacttaattagtaggtttgcagttcaccataag
aatgtcagtttttcgtgcagaaagcatggtgtgaataaagcagatgttcatactgtgggg
tcaaactcaaccatggctgcaataagagctgtatatggactctctatatctcgtgattta
gtcgatgtgacggcttcagagaatgatccttctcaatcagtatttgacatgaagggcttc
atttctaatgcaaattacaatgccaagaaaacaactatggtgttgtttataaatgagagg
ttagttgaatgcacacccctgaaacgtgctattgaagtagtttatgccgcaaccgtgcca
aaagcagcaaaaccttttgtctacatgtcaattgtgcttcctcctgaacatatagatgtg
aatgtgcatccaacaaagagagaggttagcttgttgaatcaagaatatatagttgatgct
atacaaaatgcagttcagtcaaagatgataagctctaatacagagagaacatttcacata
cagactttacttcctggtgcttctagcctcctgaatgcacataaaagcacagaacaaaat
tcctcacctgggacgcaatcgcagaaggttccagttaataaaatggtgagggttgattcc
cttgatccagctggcaggatgcatgcctacttgcaggacaaatcaattggaaaatgtgat
tctaaaactgatttggcttctgttaggtctgctgtacgacaaaggcgaaatcccaaggaa
agtgctgatttaactagcattcaagaacttcttagtgatgttgattccaatactcatgct
ggtctgctggaaattgtgaaacattgtacatatattggaatggctgatgattttttggca
cttcttcaatataatactcggttgtatctcatgaacgttgtgaatataagcaaagagctt
atgtatcagcaagttatgcggagatttgctcatttcaatgctatacagctgagtaatcct
gctcctctacctcagttgatgttaatggagttggaagaccaagagctggcatctgcatgt
caggagagtgatggagaaaaggacaaaattgtgaaaatgaacacagagctacttaagcaa
aaaagtgagatgctgatggagtatttctgccttgaaatagatcaagcagggaacttgtcc
aagctaccagttatcattgatcagtacacacctgatatggatcgtctgcctcagtttgtt
tggagattaagtaatgatgttgattgggatgatgaaaggaattgcttccaatcagttgca
gctgtccttgctgatttttatgctatgcatcctcctctcctgcctaacccttcaggtgaa
gggctgcaattttataaaaagaatttggaaagaagtggccaagatgactgcctatcttca
gaagacgtcatcaatgaagagttagttggtgtagctgaaacagcatggtcacagagggaa
tggaccattcagcatgtcttgtttccttccatgaggctgttcttgaagcctaacaatcaa
atggcaacggatgggacttttgttcagattgcaaccctcgaaaagctttaccgggtcttt
gaaagatgttga
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