Nymphaea colorata (blue-petal water lily): 116266759
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Entry
116266759 CDS
T07418
Name
(RefSeq) protein transport protein Sec24-like At3g07100 isoform X1
KO
K14007
protein transport protein SEC24
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116266759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116266759
Membrane trafficking [BR:
ncol04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116266759
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
116266759
NCBI-ProteinID:
XP_031503945
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All DBs
Position
13:11218957..11232165
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AA seq
988 aa
AA seq
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MQPMGNERPGAPNYGSRPPFPIGAPPQTTIPSQSPGPGPVHASDPSFIRPVAPPWFGGPP
SMVPPTSSYPSYVGQNQRFPSPPYPSSAQTINPSGLPAAGQVTPPPVTHFGVNQAAVSHP
PMQQVLTPPPPAALRPQVQTAPVPMGPPPVGANFMQPREPAPSSFEPAFPVSRPVSQPPM
QQYPFRAPQAGYVPPPPMVNSLGQSPKDSIQGGFQALVEEFLSLSVAPTPGSMDSGIDSK
SLPRPFDGDAVPSSFSEMYPLNCHSRYLRLTTSVIPNSQSLLSRWHLPLGAVVHPLAEPP
DGEEVPVINFGPTGIIRCRRCRTYINPYVTFTDGGRKWRCNICALFNDVPGDYFAHLDAN
GRRSDIDQRPELSKGSVEFVAPTEYMVRPPMPPLYFFLIDVSLTAVRSGMLEIAANTIKA
CLNNLPGFPRTQIGFITFDSTLHFYNMKSTLMQPQLMVVADLDDIFLPLPDDLLVNLSES
RAVVDAFLDSLPSMFQGTANVESAFGPAVKAAQMVMSQLGGKLLIFQSSLPSLGIGRLKL
RGDDMRIYGTDKEHTVRIPEDPFYKQMAAELVKFQIAVNLYLFNDKYGDIASLGALAKYT
GGQVNYYPSFQGNIHKEKFKHELMRDLTRETAWEAVMRVRCGKGVRFTTYHGHFMLRSSD
LMALPAVDCDKAFAMQLALEETLLTTQTVYFQVALLYTSSSGERRIRVHTAAAPVVADLG
EMYRHADTGAIVTLLSRMAVEKTLTSKLEDARQTVQLKIVKSLKEYRNLYAVQHRLTGRL
IYPDSLKYLPLYALALCKSIPLRGGYADAQLDERCAAGYNLMVVPISRLLKLLYPSLFRI
DDYLLKGPDTVDDYAKVLQRVPLTADSLDPRGLFLYDDGFRFIIWFGKVLSSDIIANIIG
ADAMGFGSFSEINLTEQNNQFSRKLFLMLKKMRENDPSFYQHCHIVRQGEQPREGSLLLL
NLVEDQIGGTSGYVDWIVQIHRQVQQGP
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaatgggaaatgaaagaccaggggctccaaattatggtagtaggcctcccttc
cccattggagccccccctcaaactaccattccttctcaatcgcctggacctggacctgtg
catgcatctgacccatctttcattagacctgtagctcctccttggtttggtggaccccca
tctatggtaccacccacatcatcatacccctcgtatgtgggacagaaccagcgtttccct
tccccaccatatccttcaagtgctcaaaccatcaatccctctggcctgcctgctgctggt
caagtaacacctcctcctgttacacattttggagttaatcaagctgcagtctctcatcct
ccaatgcaacaggttttgactcctcctcctcctgctgctcttcgtccccaggttcagact
gctccagttccaatgggtcctcccccagtaggagcaaacttcatgcagccaagagaaccc
gctccttcatcatttgaaccggcatttcctgtatcaagacctgtgtcacaaccacccatg
caacaatatccttttcgtgcacctcaagctggttatgttcctcctccacctatggttaat
tctttaggtcagagtcctaaggattcaatccaaggagggtttcaggcactggttgaagaa
tttttatcactatctgtagcccctacacctggttcaatggactctggaattgattccaaa
tcattgccaaggccatttgatggtgatgcggtaccgagttcttttagtgagatgtaccca
ttaaactgccattcaagatatttgcgcttaacaactagtgtgattccaaactctcaatca
ttgctgtcaaggtggcatttgcctctaggagctgtggttcatcctcttgcagaacctcct
gatggggaagaagtgccagtcattaacttcggacctacaggaatcatccgttgtagaaga
tgccgaacctatattaatccatatgttacttttacagatggaggcagaaagtggagatgc
aatatatgtgcattgttcaacgatgttcctggtgattattttgcacatttggatgcaaat
ggtagacgctctgacatcgatcaacgacctgaactctcaaagggtagtgtagaatttgtt
gctcctaccgaatatatggtccggcctccgatgccaccactttactttttccttattgat
gtatcattgacagctgtcagaagtggcatgcttgagatcgccgccaacactatcaaggcc
tgtttgaacaatctgcctggattcccgaggacacagattggcttcataacatttgacagc
actctacatttctataacatgaagtcaactttgatgcagcctcaactgatggttgtggca
gatcttgatgacattttcctacctttgcctgatgaccttcttgtcaacttatcggagtca
agagcagtagtggatgcttttctggatagtctgccatccatgttccaaggcactgcaaat
gttgaatctgcctttggacctgctgttaaggctgcgcagatggttatgagccaacttgga
ggaaagttgctcatctttcagagttcgttgccttcacttgggataggtcgtctaaagcta
cgtggtgatgatatgcgtatctatggaactgataaggaacatactgtacgaataccagag
gatccattttataagcaaatggctgcagagcttgtcaagtttcagattgcagtgaatcta
tatcttttcaatgacaaatatggtgatatagcttctttaggagcacttgcaaagtacaca
ggaggccaggttaattattatccttcttttcagggaaatattcacaaagaaaagttcaaa
catgagctaatgagggaccttactagagagactgcatgggaagctgttatgcgtgtcagg
tgtggaaaaggagtgcgatttactacttatcatggccattttatgctgaggtcatccgac
ttgatggcacttccagcagtagattgtgataaagccttcgcaatgcaacttgcactcgag
gagacattactgaccacccagactgtatattttcaagttgctcttttgtatacatcctca
tctggtgaacgacgaatacgagttcatacagcagcagcacctgtggtagctgatcttggg
gagatgtaccgccatgctgatactggagctattgttacattattgagtcgaatggctgtt
gagaaaaccttgacaagtaagctggaagatgctcgccaaaccgttcaactaaagatagtt
aaaagcctaaaggaatatcgaaatctatatgctgttcagcaccggttgactggcagattg
atatatccagattctttgaaatatttgcctctgtatgcattggctttgtgtaaatccata
cctctacgtggtgggtatgctgatgctcagcttgatgagcgttgtgcagctggttacaac
ttgatggtcgtgcccattagtaggttactgaagcttctctatcctagtttgttccggatc
gatgactatcttttgaagggacctgatacagttgatgattatgccaaagttctgcaacgg
gtgcctttgacagcagattcattggatccaagaggcctctttctttatgatgatggattc
cgattcataatttggttcggcaaagtgctatcttctgatataattgcaaatataatagga
gcagatgcgatgggttttggctcattttctgagattaatcttactgagcagaacaaccag
ttttcaagaaagctatttttaatgttaaagaaaatgagggagaatgacccttcattttac
caacattgtcatatagttagacaaggggagcaacccagagagggttcgctgttgcttctc
aatcttgttgaggaccaaattggtggaacaagtggctatgttgattggattgttcagatt
catcgtcaggtccaacagggcccgtga
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