Nymphaea colorata (blue-petal water lily): 116267083
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Entry
116267083 CDS
T07418
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00450
Selenocompound metabolism
ncol00970
Aminoacyl-tRNA biosynthesis
ncol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
116267083
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116267083
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncol01007
]
116267083
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncol03016
]
116267083
Enzymes [BR:
ncol01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
116267083
Amino acid related enzymes [BR:
ncol01007
]
Aminoacyl-tRNA synthetase
Class I (U)
116267083
Transfer RNA biogenesis [BR:
ncol03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
116267083
Prokaryotic type
Other AARSs
116267083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
116267083
NCBI-ProteinID:
XP_031504508
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All DBs
Position
13:2541677..2551805
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AA seq
803 aa
AA seq
DB search
MGEATGGRTPKLPIDGRRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNTV
YVCGTDEYGTATETKAMEEGCSPKEICDKYHAIHKEIYEWFDIGFDHFGRTSSPNQTVVC
QAIFNKLLENKWLTENTMQQLYCDTCNRFLADRLVEGTCPTAGCDYGDARGDQCEKCGKL
LNPTELIDPRCKVCRSSPRIRDTNHLFLELPLLKDKLEEYINKMSVAGSWSQNAIQATHA
WLREGLKSRCITRDLKWGVPVPLEKFKDKVFYVWFDAPIGYVSITACYTPEWEKWWKNPE
NVELFQFMGKDNVPFHTVMFPSTLLGTEESWTLMKTISVTEYLNYEAGKFSKSKGVGVFG
NDAKNTSIPVEVWRYYLLTNRPEVSDTLFTWTDLQAKQNSELLKNLGNFIHRVLSFVAKR
EGEGYGSIVPDAPDAESHALTKKFGDTVGDLVEQYLEAMEKVKLKQGLKIAMTISGEGNL
YLQESQFWKLYKEDKTSCSIVMRTSVGLVHLLASLLEPFMPSFSVKVLQQLNLPCETLSF
CEENGNVGRARRPWEIIPAGHKIGQPEPLFVEMKDEEVEKYRERFAGSQADRIVKAQAEA
EAKKVVKQLQKATISDETTKKKKQTKSAAAAKGKDAEPEISVARLDIRVGLITKAQKHPD
ADSLYVEEIDVGEACPRTVVSGLVKYIPLEEMQNRKVCVLCNLKPAAMRGIKSQAMVLAA
SNNDHTIVELVDPPESACVGERVRFPGFDGSPDDVLNPKKKVWETVQVDLRTTEDLVACY
KDVPFTTSGGVCKVSSIRCGTIR
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagccaccggtggtcggacgccgaagcttccgatcgacggcaggagaaatgtg
ctcattacgagcgctcttccttacgtcaacaatgttccccatcttggaaatatcatcgga
tgcgttttgagcgcggatgtcttcgcgaggtactgtcgccttcgcggctacaatactgta
tacgtttgcgggacagatgagtacggaacggccacagagacgaaggcaatggaggagggt
tgctccccaaaagagatttgtgacaagtaccatgcaatccacaaggaaatctatgaatgg
tttgatataggttttgatcactttgggcgtacatctagccctaatcaaactgttgtctgc
caagcaatattcaataaactcctggagaacaagtggctcactgagaatacaatgcagcag
ctatattgtgacacttgcaatcgctttttggctgatagacttgtggagggcacatgtccc
acggctggatgtgattatggggatgctaggggcgaccaatgtgaaaaatgtggaaaatta
ttaaatccaactgagcttatagatccaaggtgcaaggtctgtcgatcttcgccccgcatc
cgtgatacaaatcatttgtttctagaactcccattgttgaaagataaattagaagagtat
atcaataagatgtcagttgctggatcttggagccaaaatgcaattcaggcaacacatgct
tggttaagagaaggtttaaagtctcggtgtataaccagggatctgaaatggggagtaccc
gtgcctcttgagaagttcaaggataaggtattttatgtctggtttgatgcgcctattggg
tatgtatcaataacggcatgttatacaccagagtgggagaagtggtggaagaatcctgaa
aatgtggagttgtttcagttcatgggcaaagacaatgtgccatttcacactgtcatgttt
ccttcaacattgttgggtactgaagaaagctggacattaatgaaaactatcagtgtcaca
gagtatttaaattatgaagcaggaaagttctccaaaagtaaaggagtgggagttttcggc
aatgatgcaaaaaatacaagcattccggttgaagtgtggcgctattacttgctaactaat
cgacctgaagtgtcagacaccttgtttacatggacagatttacaagcaaaacaaaacagc
gagttgctgaagaacttgggaaacttcattcatcgagtgttgagctttgttgcaaaacgg
gaaggagaagggtatggatcaatagttccagatgcacctgatgcagagtcacatgcttta
acaaaaaaatttggggatactgttggcgacttagttgagcagtatctggaagctatggag
aaggttaagctgaaacaaggattaaaaatagcaatgacaatttctggtgaggggaacttg
tatctgcaagagagtcaattctggaagctctacaaagaggacaagacttcttgttccatc
gtaatgaggacatcagttgggctggttcacttattggcatctcttttagagcctttcatg
ccttctttctctgtcaaggtgcttcaacaactaaatttgccttgtgaaacgttatcattt
tgtgaagagaatgggaatgttggtagggctcggcggccttgggaaataatacctgctggc
cacaaaataggtcaaccagagccattgtttgtagaaatgaaagatgaagaagtagagaaa
tacagagagaggtttgctggaagccaagctgacaggatagtcaaagctcaagctgaagct
gaagcaaagaaggttgttaaacagctgcagaaagcaaccatttcagatgaaacaacaaaa
aaaaagaaacaaacaaaatctgcagcagcagcaaaaggaaaggatgctgaacctgagatt
tctgttgcaaggcttgatatccgtgttggcctcatcactaaggctcagaagcatccggat
gctgattcactgtatgttgaggagatagatgttggtgaagcatgtccacgtactgttgtt
agtggccttgtcaagtacatccctctcgaggaaatgcagaatcggaaagtttgtgtgctt
tgcaacctgaagccagcagccatgaggggcatcaagtcgcaagccatggttcttgctgcc
tcgaacaatgatcacacgattgttgagttggtggatcctccagagtctgcctgtgttggg
gagagggtgagatttcctggttttgatggcagccccgatgatgtgctgaatccaaagaag
aaagtttgggaaacggtgcaggttgacctgagaacaactgaagatcttgttgcctgttac
aaggatgtgcctttcacgacctcaggtggtgtttgcaaagtttcatctattcgttgcggc
acaattaggtag
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