Nymphaea colorata (blue-petal water lily): 116267102
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Entry
116267102 CDS
T07418
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116267102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116267102
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116267102
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
116267102
NCBI-ProteinID:
XP_031504532
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Position
13:complement(2572897..2587965)
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AA seq
353 aa
AA seq
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MTTEILAMELEQLAVVGNNLPGEWKDLPPELILRILSLADDRTVIVASGVCTCWRDAISL
GLSSLSLSWCKANMNNLVQSLVPKFTNLQTLILRQNKPQLNDEAVEAVANHCLDLQHLDL
SKSLKLTDRALYAVANGCTQLVKLNISGCSDFSDDALAFLASQCRSLKHLNLCGCAKAAS
DKALQALAYSCNQLQFLNLGWCEGVGDVGVMSLARGCPDLRALDLCGCVLITDDSVVSLA
NGCRHLRSLGLYYCQNITDRAMYSLANSRYGRNHEVWESVLTKHGEGLRNLNISQCTALT
APAVQAVCDSFPALHTCPDRHSLIISGCLSLTSVHCACALQPWRSAGKATIAQ
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagagatcttggccatggagctggagcaacttgctgttgttgggaacaacttg
cctggcgaatggaaggaccttcctccagagcttattttgcggattttatcgcttgcagat
gaccgtactgttattgtggcatctggtgtgtgtacgtgctggagggatgccatcagctta
ggcctctctagcctctccttgtcatggtgcaaggccaacatgaataacctagtgcaatct
cttgttcccaaattcactaatctacagacgttaatattgcgccagaacaagcctcagctg
aatgatgaagctgtggaggcggtggctaatcactgccttgatcttcagcaccttgacctg
agcaaaagcctcaagctcaccgaccgtgcattgtatgctgtggcaaatggttgcacccag
ctggttaaactaaatatcagtggctgttctgacttcagtgatgatgcccttgcatttctg
gctagccagtgcagaagcttgaagcacctaaacctctgcggatgtgcaaaggcagcatct
gacaaggccttacaggctcttgcttatagctgcaaccagttgcagttcctgaacttaggt
tggtgtgaaggagttggtgatgttggagtaatgagcttggctagaggatgtccagatttg
agggctttggatttgtgtggatgcgtgctaataactgatgatagtgtggtttctctggca
aatggatgtcgtcacttgaggtcccttggcctatattactgccagaacattactgacagg
gccatgtactctctagcaaacagccgctatggaaggaatcatgaagtctgggagtcggtc
ctgaccaagcacggagaaggcctgaggaacctgaacatcagccagtgcactgcgcttaca
gctccagctgtccaggcagtctgtgattccttcccagccctccatacatgcccagacagg
cactcactcatcatcagtggctgccttagccttacgtctgtgcactgcgcttgtgctctt
cagccatggaggtctgcaggaaaggctaccattgctcagtag
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