Nymphaea colorata (blue-petal water lily): 116267123
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Entry
116267123 CDS
T07418
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 5-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116267123
Enzymes [BR:
ncol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116267123
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116267123
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
AF_0924
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
116267123
NCBI-ProteinID:
XP_031504564
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All DBs
Position
13:17850667..17860981
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AA seq
498 aa
AA seq
DB search
MELGSSGRHNGKYIYFPLLCIAFSLVLKTATANVVLNGKNVSLSFDDVEASFTPAVVGSG
DCGMLYIAEPLNACIPLKDNVSAEGGRSPIALIIRGGCTFEDKVRNAQDAGFKAAIVYDD
EDSGALVSMAGNSVGIKIHAVFVSKASGEELKKYAGVIDMNLWIVPTFENSAWSIMAISF
ICLLAISAVLAMCFFVQRHRIRRQRPQFPHVREFHGMSSHLVKAMPSIIFTSTTEDSCTS
CTCAICLEDYAPGEKLRVLPCRHKFHAVCVDSWLTIWRTFCPVCKHDARTNMSSPPASEC
TPLLSPPVSVSASPSSSAVLSSSRSYLAASPAIRIAQSSYHSPSSSAVLSSSHSHLAAAP
AIRIAQASYHSPVCSWSQSLATTPAIQRTFRYYSNSPAMSSHLSSTDLQTVAFQRSRASP
LRSPHSLGLPYLFSSAGSTHGSQVHGSSYLPCSHNASPYHLASPLYVGSSSRHPCLLHHS
ESTTSFSPLSSAHSLPGC
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggaattgggttcttctggacggcataacgggaaatacatatatttccctctcctgtgc
attgctttttctttggtcttgaaaacagcaacagcgaacgtggtgttgaacgggaagaat
gtttccttgtccttcgatgacgttgaagcgagcttcactccagcagttgtgggatcagga
gattgtggaatgctgtatatagctgaacctcttaatgcttgcattccattgaaggataat
gtatctgcagaaggtggaagatcccccattgctttaattatcagagggggatgcacattt
gaagacaaagttagaaatgcacaggatgctggattcaaggctgctatcgtctatgatgac
gaagatagtggtgctttagtctcaatggctggaaactctgtaggtataaaaatccatgca
gtttttgtttccaaggcatcaggtgaagaactgaagaagtatgctggtgtgattgacatg
aacttgtggatagttccaacatttgaaaattcagcatggtccatcatggcaatctctttc
atatgtctacttgcaatatcagcagtgcttgcaatgtgtttctttgtgcaaaggcatcgg
ataagaagacagcgtcctcagttccctcatgttcgtgagttccacggaatgagcagtcac
ctggtgaaagcaatgccgagcataatatttacttcaacaactgaagatagctgtacatca
tgcacatgtgctatttgccttgaggactacgctcctggggaaaaactaagagtactacct
tgtcgtcacaagtttcatgcagtatgcgtggattcatggcttacaatctggaggactttc
tgccctgtctgcaagcatgatgcaagaacaaatatgagcagtcctccggcatcggagtgc
acaccgttgctttcaccaccagtatctgtttcagcatccccctcttcctctgctgtatta
tcatcttcccgttcgtatctagcagcatcacctgccatacgaatagctcagtcttcatat
cattctccatcttcctctgctgtattatcatcttcccattctcatctagcagcagcacct
gctatacgaatagctcaagcttcatatcattctcctgtctgttcttggagtcaatctctt
gcgactactcccgccattcaacgtacatttaggtattacagtaactctccagctatgagc
agccacttaagttccacagatctgcaaacagtagcatttcaaagatcccgtgcttctcct
ctacgttctcctcattctttaggtctaccttatttgttttcctctgctggttcaacccat
ggttctcaagttcatggttcctcttatcttccttgctcccacaatgcatctccataccat
cttgcatctccactctatgtggggtcttcaagtaggcatccgtgtctattgcatcatagt
gaatcaactacaagcttctctcctctttcttctgcccactctcttcctggttgttga
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