Nymphaea colorata (blue-petal water lily): 116267185
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Entry
116267185 CDS
T07418
Name
(RefSeq) clathrin heavy chain 2-like isoform X1
KO
K04646
clathrin heavy chain
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04142
Lysosome
ncol04144
Endocytosis
ncol05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116267185
04142 Lysosome
116267185
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116267185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116267185
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncol04147
]
116267185
Membrane trafficking [BR:
ncol04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116267185
Exosome [BR:
ncol04147
]
Exosomal proteins
Proteins found in most exosomes
116267185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
KELK
Motif
Other DBs
NCBI-GeneID:
116267185
NCBI-ProteinID:
XP_031504646
LinkDB
All DBs
Position
13:complement(9212210..9232929)
Genome browser
AA seq
1734 aa
AA seq
DB search
MAAASAPIAMKEALTLTSLGINPQFITFTHVTMESDKYICVRETSPQNSVIIIDMNMPAQ
PLRRPITADSALMNPNSRVLALKAQIPGSTQDHLQIFNIELKAKIKSHQMPEQVVFWKWI
TPKVLGLVTQTSVYHWSIEGESEPVKMFERTANLSNNQIINYRCDPSEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAAAFASFKVAGNDNPSILICFAAKTMNAGQITS
KMHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVSMQISHKYGLIYVVTKLGLLFVYDL
ETAAAVYRNRISPDPIFLTSEASSVGGFYAVNRRGQVLLATVNEATIIPFISGQLNNLEL
AVSLAKRGNLPGAENLVVQRFQELFSQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILVYSKQVGYTPDYLFLLQTILRTDSQ
GAVNFALMMSQMEGGCPVDYNVITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFTHYDRPRIAQLCEKAGLYLRAVQHYTDLSDIKRVIVNTHAI
EPQVCNFVLSSLWRKWSIVIFDNVLLSLQALVEFFGTLSKEWALECMKDLLLVNLRGNLQ
IIVQTAKEYSEQLGVDACIKLFEQFKSYEGLYFFLGSYLSSSEDPAIHFKYIEAAAKTGQ
IKEVERVTRESNFYDPEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYI
EGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVDECEKRNRLRLLSQ
FLEHLVNEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVA
YRRGQCDGELINVTNKNSLFKLQARYVVERMEPELWDKVLNPENEYRRQLIDQVVSTALP
ESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNSNLQNLLILTAIRADKSRV
MDYVNRLENFDGPAVGELAVEAELYEEAFAIFKKFSLNIQAVNVLLDNIRNIERAVEFAL
RVDEEAVWSQVAKAQLREGLVSDAIESFIRAEDATEFLDVIRAAEEVNAYHDLVKYLLMV
RQKAKEPKVDGELIYAYAKIDRLGEIEEFILAPNVANLQTVGDRLYDEALYEAAKIIFSF
ISNWGKLASTLVKLRQFQGAVDAARKANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQV
DDLEEVSEYYQDRGCFDELISLMESGLGLERAHMGIFTELGILYARYRPDKLMEHIKLFS
TRLNIPKLIRVCDEQQHWKELTYLYIQYDEFDNAAATIMNHSAEAWDHMQFKDVAVKVAN
VELYYKAVHFYLQQHPDLINDLLHVLALKVDHTRVVDIMRKAGHLHLVKPYMVAVQSNNV
AAVNEALNEIYVEEEDYERLRESIDMHDNFDQIGLALKIEKHELLEMRRVAAYIYKKAGR
WQQSVALSKKDNLYKDAMETCSQSGSRELAEELLSYFIEKGKKECFASCLFICYDLIRPD
VALELAWMNNMIDFTFPYLLQFIREYTTKVDELVKDKLEALEEVKSKEKEEKDTVAQQNM
YAQLLPLALPAPPMAGMGGGFQPPPPAMPSMGSIPGGMGMPPMPAFGMPPMGGY
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccagtgctccgatcgcaatgaaggaggctctaacgttaacaagcctggga
atcaacccccaatttatcacatttacacatgtgacgatggaatcagacaagtatatctgt
gtacgagaaacatccccacagaacagtgtcatcatcatcgatatgaatatgcctgcacag
ccacttaggagacctattactgcagactctgcattgatgaatccaaacagcagagtattg
gctctaaaagctcaaatacctggaagtacacaggatcaccttcagatattcaatattgag
ttgaaggctaaaataaaatcacatcagatgcccgaacaggttgtcttctggaagtggatc
actcccaaggtgttgggattagttactcaaacatcagtttatcactggtcgatagaaggt
gagtctgagcctgtaaagatgttcgaaaggactgcaaatttatctaacaatcaaataatc
aactaccggtgtgatccctctgaaaagtggcttgtcctaattggaattgcgcctggtgca
ccagagaggcctcaacttgttaaggggaacatgcaactcttttctgtagatcaacagcgt
agtcaagctctagaagcacatgctgcagcctttgcatcatttaaggttgctgggaatgat
aatccttccattcttatttgctttgctgcaaagacaatgaatgcgggccaaattacttca
aagatgcatgttattgaactaggtgctcagccaggaaaacctagcttcacaaagaagcag
gcagaccttttctttccccctgattttgctgatgatttcccagtctcaatgcagatatca
cataaatatggtttgatctatgtggtcacaaagcttggacttctttttgtgtatgatctc
gagactgctgctgcagtttacagaaatcgaattagtccagacccaatttttttgacttca
gaagcatcgtcagttggaggattttatgctgtgaaccgtagaggacaagtattacttgca
actgttaatgaggcaacaatcattccttttatcagtggccagttgaacaatctggagcta
gctgtaagccttgctaaaagggggaacctgccaggggcagaaaatttggttgttcaacga
tttcaggagctattttcccaaacgaaatataaggaggctgctgagcttgctgctgaatct
ccacaaggaattctccgcacacctgatactgtagccaagttccagagtgttcctgtgcaa
gctgggcaaacaccacctctgttgcagtactttgggacattattaaccaaaggaaagctt
aatgcattcgagtcattggagttatcacgtttggttgtaaatcagaataagaaaaatctt
ctagaaaattggctggctgaagacaagcttgaatgcagtgaagagcttggggatcttgtc
aagactgtggacaatgaccttgcattaaaaatatacataaaagcaagggccaccccgaaa
gttgttgcagcttttgctgagcgaagagaatttgacaagattcttgtttactcaaaacaa
gttggttataccccagactatctcttccttttgcaaactattttgagaacagactctcag
ggtgctgtcaattttgcactcatgatgtctcagatggaagggggttgcccagttgattac
aatgttatcacagatctcttcctgcagagaaatatgatacgagaagcaactgcatttttg
ctggatgttctgaagccaaacttgccagaacatgcctttcttcaaacaaaggttttggag
atcaatctggtcacttttccaaatgttgctgatgcgatattggcaaatggtatgttcacc
cactatgaccgtcctcggattgcacaactatgtgaaaaagctggcctgtatttgcgagct
gttcagcactatactgatctgtctgacattaaacgtgtgatagtgaatacacatgctatt
gagcctcaggtttgtaactttgtgctttcttcattatggagaaagtggagcattgttata
tttgataatgttcttttatctttgcaggcattggtggagttttttggtactctctcaaaa
gagtgggctttagaatgcatgaaagaccttctactcgtcaatcttagaggcaatcttcag
ataattgtccagacagcaaaggaatactcagagcagctaggggttgatgcgtgcattaaa
ctctttgagcagttcaaatcctatgaaggcctttactttttcctgggttcatatttgagc
tccagtgaggatcctgccatacatttcaagtacatagaagcagctgctaaaacgggtcag
attaaggaggttgagcgtgtcacaagagaatctaatttttatgacccagagaagacaaag
aactttttgatggaagcaaagcttccagatgcacgccctctaataaatgtctgcgatcga
tttggttttgtgcctgatctgactcactacctgtacactaacaacatgctgcggtatatt
gaaggttatgtgcagaaagtcaatcctgggaatgctcctttagttgttggccagctttta
gatgatgagtgtcctgaagatttcatcaaaggccttattctctctgttcgttctcttctt
cctgttgagccacttgtagatgagtgtgagaagagaaaccgcctccgtttactttcacag
ttcttagagcatctagtaaatgaaggcagccaggatgttcatgtgcataatgctcttggg
aagatcattatcgacagcaacaacaatccagagcacttcctgactactaatccctactat
gattcacgtgttgttggtaaatactgtgaaaagagggatccaactcttgctgttgttgca
tatagacgtggtcaatgtgatggtgagcttatcaatgttaccaacaagaattcccttttc
aagctgcaggcaagatatgttgtggagagaatggaaccggagctatgggataaagttctt
aaccctgagaatgagtacaggcgccagcttattgatcaagtagtgtcaactgctttacca
gagagcaagagtccagagcaagtatctgcagcagtaaaagcatttatgactgcggacctt
ccacatgagcttattgagcttcttgagaagatagttctccagaattctgcatttagtgga
aactccaatctgcagaacttgttgatccttacagctattagggctgataaatcccgtgtt
atggactatgttaaccgcttggagaattttgatgggcctgctgttggtgagcttgctgtt
gaagcagagctatatgaagaagcctttgctatctttaagaaatttagcctgaatatacag
gcagtgaatgtactgctggataatattcgaaacatagaacgtgcagttgagtttgctctt
cgtgttgatgaggaagctgtttggagccaagtagctaaagctcaactcagggagggactt
gtcagtgatgccattgagtcatttatacgtgctgaagatgctactgagttcctggatgtg
attagggcagcggaggaagtgaatgcttaccatgatcttgtcaagtaccttctcatggtg
aggcaaaaggccaaagagccgaaggtggatggtgaactcatatatgcttatgcaaagatt
gacaggctgggagagattgaagaattcattcttgcaccaaacgttgctaatctccaaact
gtgggtgatcgcctatatgatgaagctttatatgaagctgctaagatcatattctcgttt
atttcgaactggggaaaacttgccagtactcttgtaaagttgaggcagttccaaggtgct
gttgatgcagctcgcaaggctaacagttcaaagacttggaaggaggtttgttttgcttgt
gttgatgctgaggagttccgcttggctcaaatatgtggtctgaacattattatacaggtc
gatgatttggaagaagtgagtgaatactatcaagacagagggtgctttgatgagcttatc
agccttatggagagtggtcttggtttggagcgggcacatatgggaatcttcacagaatta
ggcattttatatgccagataccgtccagataaacttatggagcacattaaactattctcc
acgcgtcttaatattccaaagcttatccgtgtgtgtgatgagcaacaacactggaaagaa
ctcacttacttgtatatccaatatgatgaatttgacaatgctgctgcaactattatgaat
cattcagctgaagcttgggaccatatgcaatttaaggatgtggctgtcaaggtggctaat
gtggagctgtactacaaggcagtgcacttttacttacaacagcatcctgacctaataaat
gatcttctccatgtccttgctcttaaggtggatcatacccgtgttgttgacataatgcga
aaggcaggacacttgcatcttgttaaaccatacatggttgctgtacaaagcaacaatgtt
gctgcagtaaatgaagctcttaacgaaatctatgtcgaagaggaggactatgaaagatta
cgtgaatccattgatatgcatgataactttgaccaaattggccttgctctgaagattgag
aagcatgagcttctcgagatgcggagggttgcagcatacatatataaaaaggctggcaga
tggcagcagtcagttgccttatcgaagaaggacaatctctacaaagatgccatggagaca
tgttctcagtctgggagccgtgaactggctgaagaattgcttagttacttcattgaaaag
ggaaagaaagagtgtttcgcttcatgcttatttatatgttatgacttgattcggcctgat
gttgctcttgagcttgcctggatgaacaacatgattgatttcacattcccatatcttcta
cagttcattcgtgagtacactaccaaggtagatgagcttgtgaaggacaagctggaagca
ctggaagaagtgaaaagcaaagaaaaagaagagaaggatacggttgcccagcagaacatg
tatgcacagcttctcccacttgcgttgcctgctccacctatggctggtatgggtggagga
ttccagcctccgccgcctgccatgccatcaatgggtagcattcctggtggcatgggtatg
ccgcccatgccagcatttggaatgccacctatgggtggatactga
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integrated database retrieval system
