Nymphaea colorata (blue-petal water lily): 126409797
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Entry
126409797 CDS
T07418
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit alpha-like
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126409797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
126409797
03400 DNA repair and recombination proteins [BR:
ncol03400
]
126409797
Enzymes [BR:
ncol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126409797
Transcription machinery [BR:
ncol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
126409797
DNA repair and recombination proteins [BR:
ncol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
126409797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
126409797
NCBI-ProteinID:
XP_049932146
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All DBs
Position
2:complement(28379540..28385677)
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AA seq
341 aa
AA seq
DB search
MVREEVPVSTRTLQWKCVESRADSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGELEGT
CITRAKSDKVPHEYSTIVGIEESVHEILMNLKKIVFRSDLYGTLDASIYVRGPRHVTAQD
IISPPSVEIVDTTQHIAVLTEPVDLCIELKIERGRGYCTRTPNNYQDGSYPIDAVSMPVR
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFXHAEEQDINRN
MEDNXKRASVPFFTFDDGLDNMKREIILKRIFIDQLELPPRTYNCLKRSNIHTLLDLLSK
SQEDLMRIEHFRVEDVKQIFDILQKGFTIDLLKNSTQFESR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaggaagtaccagtatccactcggacgctacagtggaagtgtgttgaatca
agagcagacagcaaacgcctttattatggtcgtttcgttttatccccacttatgaagggt
caagccgatacaatcggtatcgcgatgcgaagggctttacttggagaactagaaggaaca
tgtattacgcgcgcaaaatctgataaggtaccacatgaatattctacgatagtaggtatt
gaagaatcagtccatgaaattttaatgaatttgaaaaaaattgtatttagaagtgatctg
tacggaactctcgacgcatctatctatgtcaggggccctagacacgtaactgctcaagat
atcatctcaccaccttctgtagaaatagttgatactacacagcatatagctgtcctaacg
gaaccggttgatttgtgcattgaattaaaaattgagaggggtcgtggatattgtacgaga
accccaaataactatcaagacggaagctatcctatagatgctgtatccatgcctgttcga
aatgcgaatcatagtattcattcttatgggaatgggaatgagaaacaagagatacttttt
cttgaaatatggacgaatggaagtttaactcctaaggaagcgctttatgaagcttctcgt
aatttgatcgatttatttattccttttntacatgcggaggaacaggacataaatagaaat
atggaggacaatncaaaaagggctagtgtgcccttttttacctttgatgatggattggat
aatatgaaaagagaaatcatattgaaacgtatttttattgatcaattagaattgcctcct
aggacttataactgtctcaaaaggtctaatatacatacattgctggaccttttgagtaaa
agtcaagaagatcttatgagaattgagcattttcgcgtagaagacgtaaaacaaatattc
gacattctacagaagggtttcacaatcgacttgcttaaaaattcaactcagtttgaatcc
cgttga
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