Nymphaea colorata (blue-petal water lily): 67273276
Help
Entry
67273276 CDS
T07418
Symbol
rpoA, K8L28_pgp031
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
67273276 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
67273276 (rpoA)
03400 DNA repair and recombination proteins [BR:
ncol03400
]
67273276 (rpoA)
Enzymes [BR:
ncol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
67273276 (rpoA)
Transcription machinery [BR:
ncol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
67273276 (rpoA)
DNA repair and recombination proteins [BR:
ncol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
67273276 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
67273276
NCBI-ProteinID:
YP_010167160
UniProt:
A0A894KC44
LinkDB
All DBs
Position
Pltd:complement(83797..84822)
Genome browser
AA seq
341 aa
AA seq
DB search
MVREEVPVSTRTLQWKCVESRADSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGELEGT
CITRAKSDKVPHEYSTIVGIEESVHEILMNLKKIVFRSDLYGTLDASIYVRGPRHVTAQD
IISPPSVEIVDTTQHIAVLTEPVDLCIELKIERGRGYCTRTPNNYQDGSYPIDAVSMPVR
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEQDINRN
MEDNQKRASVPFFTFDDGLDNMKREIILKRIFIDQLELPPRTYNCLKRSNIHTLLDLLSK
SQEDLMRIEHFRVEDVKQIFDILQKGFTIDLLKNSTQFESR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaggaagtaccagtatccactcggacgctacagtggaagtgtgttgaatca
agagcagacagcaaacgcctttattatggtcgtttcgttttatccccacttatgaagggt
caagccgatacaatcggtatcgcgatgcgaagggctttacttggagaactagaaggaaca
tgtattacgcgcgcaaaatctgataaggtaccacatgaatattctacgatagtaggtatt
gaagaatcagtccatgaaattttaatgaatttgaaaaaaattgtatttagaagtgatctg
tacggaactctcgacgcatctatctatgtcaggggccctagacacgtaactgctcaagat
atcatctcaccaccttctgtagaaatagttgatactacacagcatatagctgtcctaacg
gaaccggttgatttgtgcattgaattaaaaattgagaggggtcgtggatattgtacgaga
accccaaataactatcaagacggaagctatcctatagatgctgtatccatgcctgttcga
aatgcgaatcatagtattcattcttatgggaatgggaatgagaaacaagagatacttttt
cttgaaatatggacgaatggaagtttaactcctaaggaagcgctttatgaagcttctcgt
aatttgatcgatttatttattccttttttacatgcggaggaacaggacataaatagaaat
atggaggacaatcaaaaaagggctagtgtgcccttttttacctttgatgatggattggat
aatatgaaaagagaaatcatattgaaacgtatttttattgatcaattagaattgcctcct
aggacttataactgtctcaaaaggtctaatatacatacattgctggaccttttgagtaaa
agtcaagaagatcttatgagaattgagcattttcgcgtagaagacgtaaaacaaatattc
gacattctacagaagggtttcacaatcgacttgcttaaaaattcaactcagtttgaatcc
cgttga
DBGET
integrated database retrieval system