Candidatus Nanohalobium constans: LC1Nh_0068
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Entry
LC1Nh_0068 CDS
T07315
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ncon
Candidatus Nanohalobium constans
Pathway
ncon04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ncon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LC1Nh_0068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncon03019
]
LC1Nh_0068
03009 Ribosome biogenesis [BR:
ncon03009
]
LC1Nh_0068
04131 Membrane trafficking [BR:
ncon04131
]
LC1Nh_0068
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncon04147
]
LC1Nh_0068
Messenger RNA biogenesis [BR:
ncon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
LC1Nh_0068
Ribosome biogenesis [BR:
ncon03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
LC1Nh_0068
Membrane trafficking [BR:
ncon04131
]
SNARE
SNARE associated proteins
Others
LC1Nh_0068
Autophagy
Aggrephagy
Other aggrephagy associated proteins
LC1Nh_0068
Exosome [BR:
ncon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LC1Nh_0068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
TIP49
AAA_22
AAA_14
AAA_5
AAA_33
AAA_18
nSTAND3
NPHP3_N
AAA_3
AAA_28
RNA_helicase
IstB_IS21
AAA_lid_PRS2_C
Sigma54_activat
Zeta_toxin
Mg_chelatase
AAA_7
SLFN-g3_helicase
NB-ARC
DUF815
NACHT
ATPase
AAA_24
TsaE
AAA_17
PhoH
AAA_30
AAA_11
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
QGA79976
UniProt:
A0A5Q0UEL6
LinkDB
All DBs
Position
complement(63637..65904)
Genome browser
AA seq
755 aa
AA seq
DB search
MGEDSVKLRVGEVPPNAQQDVGKGIVRIDSKIMEELGVREGDAVLIEGNRETVGRAARSY
PADKGLGIARMDGYTRKNAGTSLGEHVEVEPAELEEADQITLAPAEEGVVMQVSDPNMLK
RGLNGRPVIRGDIIVPDAQDRPRGLFDDMFEGMTDNMRFNFSELKLRVVKTKPRGPVKIT
ENTEIKMKEQAVKETEQKVRVPEVTYEDIGGLESEVQKVREMIELPLKHPEVFQQLGIDA
PSGVLLQGPPGTGKTLLAKAVANEADANFLSIDGPEIMSKYYGESEKQLREKFEEAREGE
PSIIFIDEIDAIAPKRGDAGGEVERRVVATLLSEMDGLESRENVIVIAATNRAEAIDPAL
RRGGRFDREIEIGVPNREGRKEVLQIHTRNMPLADDVDLDEIADLTHGYVGADLEALCKE
AAMSTLRNVLPEIDMDEEIPSEVLEKLVVDEDAMLDGLRNVEPSQMREVMVEVPQVTWED
VGGLNDTKERLQEMVEWPQKYPERFENMGIEVPKGILMYGMPGTGKTLLAKAVANEANAN
FISIKGPEVFSKYVGESEESVREIFKKARQVAPCVLFIDEIDSIAPRRGGSSGDSQVGDR
VVNQLLTELDGIESLKGVTVIAATNRPDMIDPAIMRPGRIDRNIEVEIPDEDARKRIFEV
HTEDMPLNDDVDIDKLAEKTENYVGSDIESVCREAGMNALRSDPESEEATMEDFEDALED
VRATATDENREMYRKMAQKMNNIDQEEDDQPDYYA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagatagcgtaaaactgcgtgtaggagaagttcctccgaacgcacaacaggat
gtcggcaaaggcatcgttcgtatagacagcaaaatcatggaagaactaggagtacgggaa
ggagacgcagtactgatagaaggaaaccgggaaaccgtaggaagagcagcaagaagctac
cctgcggacaaaggactcggaatagcacgaatggacggctacacaaggaaaaacgccgga
acctcactgggggaacatgtagaagtagaaccagcagaactcgaagaagcagaccagata
acacttgcacctgcagaagaaggagtagtaatgcaagtaagcgacccaaacatgctgaaa
agaggattaaacggacgcccagtaatcagaggagacataatagtccccgatgcccaggac
cgtccaagaggacttttcgacgacatgtttgaaggcatgacagacaacatgagattcaac
ttctcagaactcaaactaagagtcgtcaagaccaagccaagaggaccggtcaaaataaca
gagaacacagaaatcaagatgaaagaacaagccgtcaaggaaaccgaacaaaaggtcaga
gtaccggaggtcacctacgaagacatcggaggactggaatcagaagtacaaaaagtcaga
gaaatgatcgaactacctctaaaacatcctgaagtcttccaacaactcggaatagacgca
ccatcaggagtactcctccaaggaccgccaggaacaggtaaaacgctcctagctaaagca
gttgcgaacgaggcagatgcaaacttcctatcgatcgacggaccggagataatgtccaag
tactacggagaaagtgagaaacaactccgtgaaaagttcgaagaagcacgggaaggcgaa
ccatcgattatattcatcgatgaaatcgacgcaatcgcaccaaaaagaggtgacgcaggc
ggagaagtcgagagaagagtagtcgccacactactatcagaaatggatggcttagaatca
agagagaacgtcatcgtcatagctgcaacaaaccgtgcagaagcaatcgacccagcactg
cggcgtggcggaagattcgacagagaaatcgagatcggagtaccaaatagagaaggaaga
aaagaagtgctccagatccacaccagaaacatgcctcttgcagacgatgtggatttagat
gagatagcagacctgacacacggatatgtgggggcagacctggaagcgctgtgtaaggaa
gcagctatgtccaccttaagaaatgtattgcctgaaatagacatggacgaagaaatacca
agcgaagtactggagaagctggtagttgacgaagatgcgatgctggacggcttgagaaat
gtcgagccaagccagatgcgtgaagtaatggttgaagtaccacaggtcacctgggaagac
gtcggagggctcaacgacaccaaagaaagacttcaggaaatggttgaatggccgcagaag
tacccagaaagattcgaaaacatgggaatcgaagtaccaaaaggcatcctaatgtatgga
atgccaggaacaggaaagactctgctcgccaaagcagtagcaaacgaagccaacgcaaac
ttcatctccatcaaaggacccgaagtcttctcgaagtacgtaggagaatcagaagaatcc
gtcagagaaatcttcaagaaagcaaggcaggtcgcaccatgcgtactattcatcgacgag
attgactcgatagcaccgcgtagaggcggcagcagcggagactcacaggtaggagaccga
gtagtaaaccagctactcacagagctcgatggaatcgaatcattgaaaggagtaacagtt
atagcagcaacgaaccgacctgatatgattgatccggcaattatgcgtcctggaagaatc
gatagaaacatcgaagttgagataccagatgaggatgcaagaaagagaattttcgaagta
cacacggaagacatgcctctgaacgatgatgtcgacatcgataaacttgctgagaagaca
gagaactatgttggttcagatatcgaatctgtatgtcgtgaagcaggcatgaacgctttg
agaagtgatccagaaagtgaagaagcaacaatggaagactttgaggacgccttggaggat
gtacgagctaccgccacagatgagaatcgggagatgtacaggaagatggcgcagaagatg
aacaacatcgaccaggaagaagacgaccagcctgattattacgcctaa
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