Candidatus Nanohalobium constans: LC1Nh_0080
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Entry
LC1Nh_0080 CDS
T07315
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ncon
Candidatus Nanohalobium constans
Brite
KEGG Orthology (KO) [BR:
ncon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncon03032
]
LC1Nh_0080 (topA)
03400 DNA repair and recombination proteins [BR:
ncon03400
]
LC1Nh_0080 (topA)
Enzymes [BR:
ncon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LC1Nh_0080 (topA)
DNA replication proteins [BR:
ncon03032
]
Prokaryotic type
DNA Topoisomerases
LC1Nh_0080 (topA)
DNA repair and recombination proteins [BR:
ncon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LC1Nh_0080 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
LPD25
Activator-TraM
Mnd1
Motif
Other DBs
NCBI-ProteinID:
QGA79988
UniProt:
A0A5Q0UEM6
LinkDB
All DBs
Position
complement(73719..75752)
Genome browser
AA seq
677 aa
AA seq
DB search
MVGEKPNVASKLAQALGNYSIEENHGVKNYIVETDDEKIIIAPAVGHIFNLEQTSEGWDY
PVFEVDWAPTFETSDSADYMKKYYRNLRDQCEKADEYINACDFDLEGSVIGDRVIKELGT
TDESRIRRMKFSTLTPSDLEEAFDNLEDFDKGMTEAGLTRHILDFYYGINVSRALMQAVR
ENDRYKTLSTGRVQGPALNFLAEREREIQEFEPDPYWEIFLHNSEFRAKFHDDGDERIWE
EEVADGIFSEIEGEDEAEVSNIKINNYSHKPPVPFNLTGLQKEASSQFNINPKTTQSIAQ
DLYEDSLISYPRTESQKLPPKIGYKNILNKLKNQENYTEKAKKVLKKDKSDNLYTKQGKK
EDDAHPAIYPTGQNPGNLSKNERKVYDLIVKRFFAVFGKPAKRQSLTMTLEVNGYTFNAK
SKVTKKRNWFDLYDPYVKVEEAELPELEEGEKLPVDEFEQAEKETQPPRRFSQTSIVSEL
EKRNLGTKATRAQVVDRLYDREFIKDDPIVVTDLGLTIAETLEEYSPEIVSEELTREFEE
RMESIKNQEESKEEALERARDELGETLRNFKEQEKEIGAKLVRAIDKYRDQKRKLGPCDR
DDCDGTLQIIRTDNGRFVGCTEYDDCENTYPLPNNGEVTSQGEICDECGTPKIHVSRKSG
NNYEMCIDPDCSTKDDW
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggttggtgagaagccgaatgttgcttctaagctggctcaggcattagggaactacagt
attgaggagaaccacggcgtcaagaactacatcgttgagactgatgacgagaaaattata
atcgcacctgccgtaggacacatcttcaacttagagcagaccagtgagggctgggactat
cctgttttcgaagtagactgggctccaacctttgaaaccagtgattctgcggattacatg
aaaaaatactacagaaacctccgtgaccaatgtgagaaagcagatgaatatatcaacgca
tgcgacttcgatcttgaagggtcagtcatcggagatagagttatcaaggagcttggtact
acggatgagtctcgtatcaggcgtatgaagttttctaccttgactccaagcgatttggaa
gaggctttcgacaacttggaagacttcgacaagggtatgacagaagcgggtttaactcga
cacatactcgatttctactacggtatcaatgtttcccgtgccctgatgcaggcagttagg
gaaaatgatcgttacaaaactctctcaacaggccgtgtgcagggaccagccttgaacttc
cttgctgagcgtgaaagggagattcaggagtttgaacctgatccttactgggagattttc
cttcacaactccgaatttcgggcgaagttccatgatgatggagatgagagaatctgggag
gaggaagtagcggatggaatattttcggaaattgagggcgaagatgaagctgaagtctca
aacatcaaaatcaataattacagtcacaagcctcctgtacctttcaacctgacaggcttg
cagaaagaggcttcaagccagttcaacatcaaccctaaaaccacacagagcattgcacag
gatctctatgaagactcattgatttcctatccaagaactgagtctcagaaacttccaccg
aaaattggctacaaaaatatcttgaacaagttgaagaaccaggaaaactacactgagaag
gcaaaaaaggtcttgaagaaggataaaagcgataacctgtatactaagcaaggtaagaaa
gaggatgatgctcaccctgctatctatcctacaggacagaatcccggtaatctttcaaag
aatgagagaaaggtctacgacttgatcgtcaagcgtttcttcgcagtgttcggaaaacca
gctaaaagacagtcattgacgatgacgctggaagtaaacggatacacattcaacgccaag
tccaaggttacaaagaagcggaactggtttgacctatacgatccatacgtcaaagtagaa
gaagcagagctaccagagttagaagaaggagaaaaactgccggtagacgaatttgaacag
gctgagaaagagactcagccaccaagaagattttctcagacttctatcgtttcagagctg
gaaaaaagaaatcttggaacaaaagccactcgtgcacaggtcgtagaccgtttatacgac
agagagttcatcaaagacgatccaatcgtagtaaccgatctaggtctaacaatcgctgaa
acattggaagagtacagtccggaaatcgtctccgaggaacttactagagagtttgaggaa
agaatggagtctataaagaatcaggaggagagtaaggaagaggcgttagagagagctagg
gacgagcttggtgagactctacgcaactttaaagaacaggagaaggaaatcggcgccaaa
ctggttagagctatcgataaatatcgcgaccaaaagagaaaactcggtccgtgtgacaga
gacgactgtgatggaacactacaaataataagaacagacaacggccggttcgtaggatgc
acagaatacgacgactgtgaaaacacctatccgctgcctaacaacggtgaggttacttca
cagggagaaatttgcgatgaatgtggcactccaaagattcatgtctctagaaagagtgga
aacaactatgaaatgtgtatagatccggattgttctacgaaagacgattggtaa
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