Candidatus Nanohalobium constans: LC1Nh_0296
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Entry
LC1Nh_0296 CDS
T07315
Symbol
pcnA
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
ncon
Candidatus Nanohalobium constans
Pathway
ncon03030
DNA replication
ncon03410
Base excision repair
ncon03420
Nucleotide excision repair
ncon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC1Nh_0296 (pcnA)
03410 Base excision repair
LC1Nh_0296 (pcnA)
03420 Nucleotide excision repair
LC1Nh_0296 (pcnA)
03430 Mismatch repair
LC1Nh_0296 (pcnA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncon03032
]
LC1Nh_0296 (pcnA)
03400 DNA repair and recombination proteins [BR:
ncon03400
]
LC1Nh_0296 (pcnA)
DNA replication proteins [BR:
ncon03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
LC1Nh_0296 (pcnA)
DNA repair and recombination proteins [BR:
ncon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
LC1Nh_0296 (pcnA)
MMR (mismatch excision repair)
Other MMR factors
LC1Nh_0296 (pcnA)
TLS (translesion DNA synthesis) factors
Other TLS factors
LC1Nh_0296 (pcnA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Rad1
HMA_PCA1
Rad9
Hus1
Motif
Other DBs
NCBI-ProteinID:
QGA80199
UniProt:
A0A5Q0UGU2
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All DBs
Position
complement(251547..252302)
Genome browser
AA seq
251 aa
AA seq
DB search
MFKAEIEEVGLLKDSMKTISDLISEGLFQLTEDGIQLVAADPAMVGLVDFTLKEEVFETY
EINEETKVGLNIENLYSILRRANSGDTITLSVDEDTSKFKIEMVNNSTRDFSLPILNLSE
DDIPSVGDLDQFTFNTDLDTSVLEGAIKDAMVVSDAVTITADGDSLNISAEGDQSGVDFT
VESGAEGVHEMSGSDAKSMFSLDYLSKMIGAKKLADTVTVKLGQDFPMRMEFTQPDQVDL
NFVLAPRIEED
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagcagaaatagaagaagtcggacttctcaaagactcaatgaaaaccatcagc
gacctcatcagcgagggactattccagctgacagaggacggaatccagctagtagcagct
gaccctgcgatggtcggattagtcgacttcacactcaaagaagaagtattcgaaacatac
gaaatcaacgaagaaaccaaagtaggactcaacatcgaaaacctatacagcatcctacgc
agagccaacagcggagacacaatcacactatcagtcgacgaagacaccagtaaattcaaa
atagaaatggttaacaactccacaagagacttctcactaccaatactaaacctatcagaa
gacgatattccttcagtcggagacctagaccagttcacattcaacacagatctagacaca
tcagtgctggaaggagcaatcaaagacgcaatggtagtaagcgatgcagtaaccatcaca
gcagatggagattcactaaatatctcagcagaaggagaccaatccggagtagacttcaca
gtagaatccggagcagaaggagtccacgaaatgagcggcagcgacgccaaatcaatgttc
agcctggactatctctcgaaaatgatcggagccaaaaaactagcagacacagtaacagtc
aaacttggacaggacttcccaatgaggatggagttcacacagcctgatcaggtagacctg
aactttgtgctcgctccaagaattgaagaggactaa
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