Candidatus Nanohalobium constans: LC1Nh_0331
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Entry
LC1Nh_0331 CDS
T07315
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ncon
Candidatus Nanohalobium constans
Brite
KEGG Orthology (KO) [BR:
ncon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncon03400
]
LC1Nh_0331
Enzymes [BR:
ncon01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
LC1Nh_0331
DNA repair and recombination proteins [BR:
ncon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
LC1Nh_0331
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
RNase_P_pop3
Motif
Other DBs
NCBI-ProteinID:
QGA80232
UniProt:
A0A5Q0UF61
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All DBs
Position
274296..275708
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AA seq
470 aa
AA seq
DB search
MASIILPNQLFPEPVEEDKKYLVEHSRYFTDFKFHRKKLVLHRASMKVYNEELDGEYIGY
DQDLAKIFKKEDRIRMYDPVDHKVRNQIEALAEKHDAELIFEETPGFMASMEFNGEYFES
HEYFQLNYYKQMRKKHNVLVDEDGKPEGGKWSFDPENREKMPEDIDKPEIPQFSSQHVEE
AKEYIQDNFPDNPGKIEDFFWPVTREQALENLEDFLENRLENFGDYQDAIDSDLKFGFHS
LLSSSINIGLITSEEVVEKTLESHEKHDYPMNSLEGFLRQIIGWREFIRAMYELEPEMSE
VNFWDADNELPEEFYTGETGLPPVDDSIQHALDDAYCHHIERLMVLGNVMLLLEVDPDEV
YDWFMEMFIDSYDWVMVPNIYGMSQYAYENMMTKPYISSSNYINKMSHYTGGKWENHWDG
LYWNFISKHEEKISDIHRMSFMTSTLNRMNEETVEEHLENAENFRSNLSS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcttctatcattctcccaaaccagctcttccccgaaccagtggaagaagacaaaaag
tacttggtggaacactcacgctacttcacagacttcaagttccacaggaagaaactagta
ctacatagagcctctatgaaggtctataatgaagaattagatggagagtatataggatac
gatcaggacttagctaagatattcaaaaaagaagaccggatccggatgtacgacccggta
gaccacaaagtccggaaccagattgaggcactggcagaaaaacatgatgcagaactaatt
tttgaggaaactccgggtttcatggcttcgatggagttcaacggagaatactttgagagc
cacgaatacttccagctaaactactacaaacagatgcggaagaaacataatgtactcgtc
gacgaagacggcaaacctgaaggcggaaaatggagcttcgatccggaaaacagggagaaa
atgccagaagacatcgacaaaccagagataccacagttttcatcccagcatgtagaagag
gccaaagagtacattcaagataacttcccggacaatcccgggaaaattgaggacttcttc
tggccagtaacacgtgaacaggcgctggagaacctggaagactttcttgaaaatagactg
gagaatttcggtgattatcaggacgcaatcgactccgacctcaagttcggcttccactca
ctgctttcatcctcaataaacatcggtttaatcacttcagaagaggtcgtggagaagact
cttgagtcgcatgagaaacatgattatccgatgaattctctggaaggattcttgcggcag
atcatcggttggcgggagttcatccgggcaatgtacgaactggaacctgagatgagtgaa
gtgaacttctgggatgcagacaacgaactgcctgaagagttttacaccggcgagacgggc
cttccacctgtagatgattcgattcagcacgctttggatgatgcttactgtcatcacatc
gagcggttgatggtgctgggtaatgtgatgctgttgctggaggtagatcctgacgaggtc
tacgactggttcatggagatgtttatcgactcgtatgactgggtgatggtgccgaacatc
tacggcatgagccagtacgcctacgaaaacatgatgaccaaaccctacatctcatcctca
aactacatcaacaaaatgagccactacaccggcggaaaatgggaaaaccactgggacggc
ctctactggaacttcatatccaagcatgaagagaagatttcggatatccacagaatgagc
ttcatgacctcaacactcaacaggatgaacgaagaaacagtagaagagcatctggaaaat
gctgagaatttcaggagtaacctgtcatcttag
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