Candidatus Nanohalobium constans: LC1Nh_0486
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Entry
LC1Nh_0486 CDS
T07315
Name
(GenBank) PKD domain-containing protein
Organism
ncon
Candidatus Nanohalobium constans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
PKD_4
PKD
Big_9
Y_Y_Y
K319L-like_PKD
CarboxypepD_reg
CarbopepD_reg_2
Cadherin_5
Cadherin_4
Ig_SIBA-E_2nd
Filamin
DUF7382
Sde0182_C
SpaA
Gmad2
DUF2505
Motif
Other DBs
NCBI-ProteinID:
QGA80386
UniProt:
A0A5Q0UFM5
LinkDB
All DBs
Position
complement(425049..428660)
Genome browser
AA seq
1203 aa
AA seq
DB search
MKRKIGSKIGLLIVFAAALTSVAAAQATINYDYNVDDVEVMAFNCLNSTDCSNVGDFGGN
ILDSGTTSNGEITIDYPAELQDHGYAVYHVSPGYVPVEAYADWSCGGSGSCGGNTTDVQF
EKISQCSATVDSFSVTNDVYANEPLTVDVSATAESTVSSAFEEAGPVDHVPEAYKDQYYS
ANTNISLEVTDTDGNPVHTAEQQKNIYMNETDQVEFGWTPSKSENYTVQASTEVIDPQCS
STNILSTDKEPITVHEERPQNEYYTLINDLDIQDNHPKATQQQTFTYSKISNYADNDYDK
TAVKTDVNYTVRDSDGQEVNFSTEQLPANQNEQDAESFSFSWTPKSAGTYTVEVAGESVQ
TEGENPPTSPDTANLEIDVAEEPKWKVEFNVVDTNGDPVNNAEVKINDRTNQTDSNGNTE
ITKLTKGSYTFNVSKTGYTTSSGSLTIESTTSDPLQKSVVIQNNNTAPKVLDIPNKKIVE
GDTNNDINLDNYVSDQQDLASEISWTSNGAEDNQNLDVNIDPDTHDVNITSTSGWTGTES
ITFTATDTAGATDSDSMTVTVTEKNTAPTVSEIPDVTLDEDTTEYDYVNLVNFVSDAEST
YNNLDVSIDVSSDKCGVSIDENEIDIAPNTNFHGTCTVTVQATDPYGATTSNNFEITVNP
VNDPPTITSNPQTTVDAYTQYYYQLSVSDPDNGAASFTYTKEQGPANMTINQNGEVTWTP
TNNNADNSPHQVTLNVSDGTNSTTQSYSLTVNKAPKNQIPHPEITVNKTKGKAPLTVNFN
ASNSADPDGSITQYNWSFGEGGKANGIETNYTYTQPGNYTATLTLTDDNGSTATESVRIE
VTGNNAPSFTSTSFKTTATVNQQYTYDAQATDPDGDTLEYSLNTAPQSMSINNNTGKITW
TPSNTGEYKVEIQVSDGTDTAIQSYNITVSSNSDNDGGGDDEDSGGSSSGGGGGGGGGGF
GGSFTTTDEEEEESIEERIQTGDNEVDLDIEPGIDDSYNLTFNVSEDTNITTSVTGNVSE
IVSVPANFTAKKGENNLPLQINGSVPGNYTGNLTLQWNNQTLNIPLNLNIEDTGASDYSV
AILHKSTADERISYDVKLWDEEKPDTSNQVSITTSVIDSEGDEVYRNTETERIYDVLVRN
YRTSILPEGEYTVTATVTDDGEEFTGSRTIQLGPSETITGQFTSSNSLGSLFQDIIDSIS
NLF
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaaataggcagcaaaataggtttactgatagtgtttgcagctgcattaaca
agtgttgcagcagctcaggctacgataaattatgattataatgtcgatgatgtcgaggta
atggcgttcaactgccttaactcgaccgactgcagcaatgtcggagatttcggaggaaac
attctggactcaggcaccaccagtaatggagagataactatcgattaccccgcagagctc
caagaccatggctacgcagtctaccatgtatcaccaggatatgtgcctgtagaggcatac
gcagactggagctgtggtggttcaggatcatgcggtggaaacactacggatgtccaattc
gagaagatttcacagtgctcagctacagtcgattcattttcagttaccaacgatgtttat
gccaatgaaccgttgacggtagacgtatctgcgactgcagaatcaacggtttccagtgct
ttcgaggaagcagggcctgtagatcatgtacctgaggcatacaaggatcagtactactcc
gctaatacaaatatcagtctagaagtaactgatacggatggaaaccctgttcacactgcc
gagcagcagaagaacatctacatgaatgagaccgaccaagtcgagtttggatggactcca
agcaagtcagagaactacactgtccaagcgtcaaccgaagtaattgacccacagtgcagc
agcaccaacatactttccacagacaaggaacccatcacagtacacgaggaaagaccgcag
aacgagtactacaccttaatcaacgacctagacatacaggacaaccatccaaaagcaaca
cagcaacagacattcacttacagcaagataagcaactacgccgacaacgattacgacaaa
actgcagtgaagactgatgtaaactacactgtaagagacagtgacggtcaagaagtaaac
ttcagcaccgaacaactacctgctaaccaaaacgaacaggatgcagaatcattctcattc
agctggactccaaagagcgcaggaacatacactgtagaagttgccggcgaatcagtccaa
acagaaggcgaaaaccctcctacctctccagatactgccaacctagaaatagatgtagcc
gaagaaccaaaatggaaagtagaattcaacgtagtagacacaaacggagacccagtaaac
aatgcagaagtcaaaataaacgatagaacaaatcaaacagactccaacggaaacacagag
atcaccaaactgactaaaggcagctacacattcaatgtctccaagactggatatacaacg
agcagcggctcattaaccatagaatcaaccacctcagatcctttacaaaaatcagtagta
atccagaacaacaacactgctccaaaagtacttgatatccctaacaagaaaatagtcgaa
ggagacaccaacaacgatatcaacctagacaattacgtatcagaccagcaagacctggca
tcggagattagctggacatctaatggagcagaagacaaccaaaacctagatgtcaacatt
gatccggatacacacgacgtaaacataacttcaaccagtggatggacaggcacagaatcg
atcaccttcacagccaccgatactgcaggagcaacagactcagactcgatgacagtcaca
gtaactgagaaaaatacagctccaacagtctccgaaataccagatgtaacacttgacgaa
gacaccacagaatacgattatgtgaacttagtgaacttcgtatccgacgcagaatcaaca
tacaacaacctagatgtatcaatagatgtctcctcagacaaatgcggcgtcagcatcgat
gaaaacgagatagacatcgcaccaaacaccaacttccacggaacatgcacagtaacagtc
caagcaacagacccttacggcgcaacaaccagcaacaactttgaaatcacagtcaacccc
gtaaacgacccgccaacaatcacatcaaacccacaaaccactgtagacgcatacacacag
tactactaccagctatccgtaagcgaccccgacaacggagcagcatcattcacatacacg
aaagaacaaggacctgccaacatgacaatcaatcaaaacggagaggtaacctggacacca
acaaacaacaacgccgataactcaccacaccaagtcacactaaatgtatcagatggaaca
aacagcaccacacaaagctacagcttgacagtaaacaaagcaccgaaaaaccaaatccct
catccagagataacagtcaataaaacaaaaggaaaagcaccactaacagtaaatttcaac
gcttcaaacagtgcagaccctgatggaagcataacacagtacaactggagcttcggagaa
ggaggcaaagcaaacggcatagaaaccaactacacatacacacaaccaggaaactacaca
gcaaccctgacattgacagacgacaacggatcaacagcaactgaatcagtgcggatagaa
gtaacaggaaacaacgctccaagcttcacatcaaccagcttcaaaacaacagcaaccgtc
aaccaacaatacacctacgatgcccaagccacagacccagacggagacacactagaatac
tcactcaacactgcaccgcaaagcatgagcataaacaacaacaccggtaagataacctgg
accccaagcaacaccggagaatacaaagtcgaaatccaagtatcagatggaacagacaca
gcaatccaaagctacaacatcacagtatcctccaactcagacaacgacggaggcggcgac
gatgaagactcaggcggctcatccagcggaggaggcggtggaggtggtggaggcggcttc
ggaggcagcttcaccacaacagatgaagaagaggaagaaagcattgaagaaagaatccag
acaggagacaacgaagtagacctggatatagaaccagggatagatgacagttacaacctg
acattcaatgtctcggaagacacaaacatcaccacaagtgtaaccggaaatgtatccgaa
atcgtgtcagtaccggctaacttcacagctaagaaaggagagaacaacctgcctctccag
attaacggctcagtacctggaaattatacaggcaacctgacacttcagtggaacaaccag
acactgaacataccactgaacctaaatatcgaggatacaggagcaagtgactacagcgtc
gcaatactccacaaatcaaccgcagatgagaggataagctacgatgtcaagctctgggac
gaagaaaaaccagacacatccaaccaggtcagcataacaaccagcgtgatcgacagtgaa
ggcgatgaggtctaccgcaacacagagacagagaggatctacgatgtactggtaagaaac
tacaggaccagcatcctgccagaaggagaatacacagtcaccgcaacagtcacagatgat
ggagaagaattcaccggcagcagaaccatccaactaggaccaagcgaaacaataacaggt
caattcacatcatcgaatagtttaggcagccttttccaagacatcattgacagcatcagc
aacctgttctag
DBGET
integrated database retrieval system
