Candidatus Nanohalobium constans: LC1Nh_0556
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Entry
LC1Nh_0556 CDS
T07315
Symbol
sdo1
Name
(GenBank) ribosome maturation protein SDO1
KO
K14574
ribosome maturation protein SDO1
Organism
ncon
Candidatus Nanohalobium constans
Pathway
ncon03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncon00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LC1Nh_0556 (sdo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncon03009
]
LC1Nh_0556 (sdo1)
Ribosome biogenesis [BR:
ncon03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
LC1Nh_0556 (sdo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
SH3BGR
Motif
Other DBs
NCBI-ProteinID:
QGA80453
UniProt:
A0A5Q0UFQ3
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All DBs
Position
481879..482625
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AA seq
248 aa
AA seq
DB search
MSQQGNVGGEGHKGSGEQEGIDTSDAIRIRYDDGKTFEILVEPEPAKKAKLEGDEFDMPR
LMFVQEVFTDAQKGERASPDELEREFNTKQIMEAAEEIFEKGDMQLTTDQKAEMREDKHK
QVVNMIARRAQNPKTGNPHPPQRVENALEEAGFNADAFQDVEEQFDDAIDSIRPIIPVSL
DKKTVAVKIPSDQAGKAYDTLQQKTEILEEQWGDNLYAKIRVPAGILTEVMEEIQKLTGG
DSEVKEEI
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcagggaaacgtcggcggtgaaggccataaaggatctggagaacaggaagga
atagatacatcggacgcgataagaataagatatgatgatggcaaaacttttgagatatta
gttgagccagagccggctaagaaggcaaagcttgaaggcgacgagtttgatatgcctcga
ctgatgttcgtccaagaagtatttaccgatgcgcagaaaggagaaagagcttctcccgac
gaactggaaagagaattcaatacaaaacaaattatggaagctgcagaggaaatcttcgaa
aaaggcgatatgcagctgacgactgatcaaaaagctgagatgcgggaggacaagcacaaa
caggtcgtcaacatgatcgcacggagagcacagaacccgaagacaggtaatcctcatccg
ccgcagagagtggagaacgctctggaggaagcaggtttcaacgcagacgcattccaagat
gtagaagagcagttcgatgacgcaatcgactcaatcagaccaatcatccctgtatccctc
gataagaaaacagttgcagtaaagattccaagcgatcaagcaggaaaagcctatgacaca
ctccaacaaaaaaccgagatacttgaagagcaatggggtgacaacctctatgccaaaata
agagtgcccgcaggaatcctgacagaagtaatggaagaaatacagaagctgactggcgga
gactccgaggttaaggaagaaatataa
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