Candidatus Nanohalobium constans: LC1Nh_0604
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Entry
LC1Nh_0604 CDS
T07315
Symbol
uvrD
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ncon
Candidatus Nanohalobium constans
Pathway
ncon03420
Nucleotide excision repair
ncon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LC1Nh_0604 (uvrD)
03430 Mismatch repair
LC1Nh_0604 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncon03400
]
LC1Nh_0604 (uvrD)
Enzymes [BR:
ncon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LC1Nh_0604 (uvrD)
DNA repair and recombination proteins [BR:
ncon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LC1Nh_0604 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LC1Nh_0604 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_30
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QGA80498
UniProt:
A0A5Q0UFW5
LinkDB
All DBs
Position
511752..514031
Genome browser
AA seq
759 aa
AA seq
DB search
MTEFSPNKQQKELIENTEGIYLVDAGAGTGKTFAITRRYINILEDQEPEDIFLATFTRNA
ADEMKERISQKSGYRASEIFDAPISTFHAHCQKILERNGHEAPQILGIDEYLTEDVRVLE
SQIRERQEFEDFISNFKQRHEEHQDFFRIVRDDSNLLSLLKSIAAKGIMPENNSWFGDTE
KYLDGDFDEFKQLFEEKNKPIKENGGSKQSELRRRLYSYKWKNFDPDAPSIDDIRGGYGT
KQVRKDFCEKAFQEDREELKQFVHDLYTEYLEYCLSRNYLNFSFLMALTYALLHKKPQIR
EEESFEYIMIDEFQDTNEIQFKLALLLADKPNFCVVGDWKQSIYSFQYAAVENILEFEDR
LEKYSGELNGSQERVNFSTEEVEKIELKKNYRSTQEILDISEKSLSLPANSNENPETPEI
TSLESETGEDGEVLRIEAEDEIEAVLTKIQELKQEESFDYSDIAVLARTRSFGLDLQQKA
RNYNISAAYEGGVELFTTNPAIVLLAWLRILQDRHSRRGWAVVLEEAGYKLEEAEKILEE
GDYPINMLKFELELQKTDSVEAVAEKVFERYGYRNGFTEKIIEVLGDTFSSTYMNLGQLI
NFIEENIEEGEIYEVDSTGNENAVTIQTIHAAKGLEYPAVFISDVNRSKFPSTNGFSPCI
IYKDPIGLRQCKKFLRNDYAYSFDNWRTEILEKCLSGEYDEERRLMYVAMTRAEKNLYIT
ADEEKASTFFTELDIEKVESRDAPEKVEEENGERKVFQV
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgacagagttttctccaaataagcagcagaaagaactgatagagaatactgaaggtatt
tacctagttgatgctggtgctggtacaggtaagactttcgcgattactcggcgctacatc
aatattttggaggatcaggagcctgaggatatcttcctagctacttttacacgaaatgct
gcggatgagatgaaagagcgtatcagccagaaatccggttatcgagcctctgaaatcttt
gatgctccgatttccactttccatgctcactgccaaaaaatcctggagaggaacggtcat
gaagcacctcagatactgggaatagatgagtaccttactgaggatgttcgggttttggag
agtcagattcgggagcgccaggagtttgaagactttatatctaatttcaagcagaggcat
gaagagcatcaggactttttcaggattgttagggacgactccaacctgttatctttactc
aagtcgatcgctgcgaaaggaataatgcctgaaaataattcatggtttggagatacggaa
aaatacttggacggcgatttcgatgagtttaaacagttatttgaagaaaagaataagccg
attaaagagaacggtggtagcaaacagagtgagttgaggagaaggctttacagctataaa
tggaagaactttgatccggatgctcctagcatcgatgatatacgcggaggatatggaact
aaacaggtcagaaaagatttttgtgaaaaagcattccaggaggacagggaagaattgaaa
cagtttgtacacgatctctacacagagtacttggagtactgcctttctcgaaactacctg
aattttagtttcctgatggcattgacctacgcattactacacaaaaaacctcaaatcaga
gaggaagagagcttcgagtatatcatgatcgatgagtttcaggacacgaacgagatacag
ttcaaactagcgcttctactcgctgataaacctaacttctgtgttgtaggcgactggaag
cagagcatctacagtttccagtacgcagctgttgaaaacatactggagtttgaagatagg
ctggagaaatactcgggagagctgaatggcagccaggagagagtaaacttttcaactgaa
gaagtagagaaaatcgaattgaagaagaactatcgttcaacccaggaaatacttgatata
tctgagaaaagcctttcgcttcctgccaactccaatgaaaaccctgagacgccggaaatc
acttcacttgaatcagagacaggggaagatggagaagtactgagaatagaagctgaggat
gagatagaagcagttcttaccaagatacaggaattgaagcaggaagaaagtttcgattac
agtgatatagcggttctggctcgtactagaagctttggactagacctacagcaaaaagcc
cggaactacaacatctcagctgcttatgagggcggagtagaattattcaccactaatcca
gcaattgtactcttggcctggctgagaatccttcaggaccggcactctagaaggggttgg
gctgttgtcctggaagaagcaggctacaaattagaagaggcggagaaaatacttgaagaa
ggagattatccaatcaacatgttgaaatttgagctggagcttcagaaaactgattcggtt
gaagctgtggctgagaaagtgtttgaaagatacgggtataggaatggatttactgagaag
atcatagaggtgcttggagatactttctcctccacatacatgaatctggggcagttgatt
aactttattgaggagaacatcgaggaaggcgagatctatgaggttgacagcacaggtaac
gagaatgcagtgactatacagactattcacgctgctaaggggttggagtatcctgcagtg
tttatctcggatgtcaatcggtcgaagttcccttccacgaatggtttctcgccctgtatc
atctataaagatcctatcgggttgaggcagtgtaagaagttcttgaggaacgattatgca
tacagttttgataactggcggactgagatcctggaaaaatgtctttccggggaatatgac
gaggagcggcgtttgatgtatgttgcgatgacgcgtgccgagaaaaacttgtacattaca
gccgatgaagaaaaggcttcaacattcttcacagaactagatatagagaaagtggagagt
agagatgctcctgagaaagttgaggaagaaaatggggaaagaaaggttttccaggtttag
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