Candidatus Nanohalobium constans: LC1Nh_0652
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Entry
LC1Nh_0652 CDS
T07315
Symbol
ffh
Name
(GenBank) signal recognition particle subunit SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ncon
Candidatus Nanohalobium constans
Pathway
ncon02024
Quorum sensing
ncon03060
Protein export
ncon03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ncon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LC1Nh_0652 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LC1Nh_0652 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC1Nh_0652 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ncon02044
]
LC1Nh_0652 (ffh)
Enzymes [BR:
ncon01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LC1Nh_0652 (ffh)
Secretion system [BR:
ncon02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LC1Nh_0652 (ffh)
Eukaryotic Sec-SRP protein
LC1Nh_0652 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
AAA_30
AAA_16
MeaB
cobW
AAA_18
Zeta_toxin
ATP_bind_1
AAA_19
AAA_31
PFOR_II
MobB
APS_kinase
nSTAND3
DUF4284
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QGA80543
UniProt:
A0A5Q0UFY0
LinkDB
All DBs
Position
complement(550998..552287)
Genome browser
AA seq
429 aa
AA seq
DB search
MFDKIKDSIQKFSSSNVADEEAVEQLVKDIQRDLIKADVDVSLVSDLSDEIREESLGEKK
DGLSRKEHVLEVVYNKLEELLGEESEVEIEPQTILLCGLYGAGKTTTTGKLADFYRKRGM
KVGVIAADTDRPAAFEQLQQIADDVEASFYGEKDAEDPVQVVENGKEELDVDVLIVDSAG
RNSLNDDLKQELSDMEKVLQPDEKYLVIPADIGQSARDQAENFDDAVGLSGVIVTKMDSS
AKGGGALVACQHADISVKFIGTGEKMADLEVYDPVDFVSDMIGQPDLESLLEKIEELDTD
PEAILEGEFTLEDFQEQMASVTDSGMMEEMMSQLPFSSDQIPDNVANLTEGKIQSYNVII
DSMTDEEVKDPSVINRERRERIANGSGTSVEDVQELIKHYRQTKNMVDKFDKKSMKRGNM
QNMMQKLGL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaaaatcaaggacagcatccagaaattctcctcaagcaatgtagcagatgaa
gaagcagtagaacaactagtcaaagacatacaaagagacctcataaaagcagatgtagat
gtaagcctggtctcagacctttctgacgaaataagagaagaaagcctgggagagaaaaaa
gacggtctaagcagaaaagaacatgtactggaagtagtctataacaagctagaagaacta
ctcggagaggaatccgaagttgagatagagccacagacaatactactatgtggactctac
ggagcaggaaagacaactacaacaggtaaactagcggacttctaccgaaaaagaggcatg
aaggttggagtcatcgcagcagacactgacagaccagccgcattcgaacagctacagcag
attgcggatgatgttgaagccagtttctacggtgagaaagatgctgaagatcctgttcaa
gtcgttgaaaacggtaaggaagagctggatgtcgatgtcttaatcgttgactcggcgggt
aggaactcgttgaatgatgatttgaagcaggaactctctgatatggagaaggttctacag
cccgatgagaagtacctggttatccctgccgatattggtcagtctgcgagagatcaggct
gagaactttgatgatgcagtaggactttctggagttatcgttactaagatggattcctcc
gctaaaggtggtggggcgctggttgcatgtcaacacgcggatatctctgtcaagtttatc
ggtaccggtgagaagatggcggacctcgaagtttacgatcctgttgactttgtgtctgat
atgattgggcagccggacctggaaagccttctggagaagatagaggagctggacaccgac
ccggaggcaattctggaaggagaatttaccttggaagactttcaggagcagatggcatct
gtcacagacagtggaatgatggaggaaatgatgagtcaactaccattctcctcagaccag
atcccagacaatgttgctaacctgactgaaggcaaaatacaatcttacaatgtcataatt
gactccatgactgatgaagaagtaaaagatccatcagtaatcaatagagaaagaagagaa
agaattgcgaacggttcaggaacatctgtagaggatgttcaggagctgatcaagcattac
cgtcaaactaagaacatggttgacaagtttgacaagaaatctatgaagcgtggtaatatg
cagaacatgatgcagaagcttgggctgtag
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