Candidatus Nanohalobium constans: LC1Nh_0761
Help
Entry
LC1Nh_0761 CDS
T07315
Symbol
recJ2
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ncon
Candidatus Nanohalobium constans
Pathway
ncon03410
Base excision repair
ncon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC1Nh_0761 (recJ2)
03430 Mismatch repair
LC1Nh_0761 (recJ2)
03440 Homologous recombination
LC1Nh_0761 (recJ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncon03400
]
LC1Nh_0761 (recJ2)
DNA repair and recombination proteins [BR:
ncon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LC1Nh_0761 (recJ2)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LC1Nh_0761 (recJ2)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LC1Nh_0761 (recJ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
PPR
EIIA-man
Motif
Other DBs
NCBI-ProteinID:
QGA80645
UniProt:
A0A5Q0UI90
LinkDB
All DBs
Position
complement(620939..622297)
Genome browser
AA seq
452 aa
AA seq
DB search
MVDDILDEAEPAAQQIKDFDGKIRLIGQYDADGINATAISHEMLDRLDKNFEYEILRQLY
EEDVERIAEEDEELLLFVDIGSGQSELIQEHIIEETDKEVVVVDHHEPQIEGDFTHLNPH
FLGIDGGEAISAAGMAYLLAKAVDEDNQDLVKYALIGATGDVQKQEGEFLGLNEELAEEA
VENDIIEKRQGLDLYGRTTKPLQKSLMYTSDPHLEGVSNDESGAIQLVKSAGVEIRENGD
FKTLADLSEEEEKQLIHKMIKRGYEVPQLLNDIYTLPNGYEIDEFSTIINACGRLGEPRK
GVKILLEDDLDLAEKISTKYGRKISSALRYFENNKEDNDVVYEDTVGIIDAGSNIGEDFI
GTVTTITMSNGAFDCPVVMGAAHAEKEQIKISSRARKEVVEDGFNLGEIIGEICEEVDGE
GGGHNIAAGAKIPRDKKDEFMESLEEKVAEEV
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggtagacgatatcctagatgaagccgaacctgcagcacagcaaatcaaagacttcgat
ggaaaaatccgtttaatcggacagtacgacgcagacgggataaacgcaacagcaatcagc
cacgaaatgctggacagactcgacaaaaacttcgaatacgagatactgaggcaactatac
gaagaagatgtagagagaatagcagaagaagacgaagaactactcctatttgtagacata
ggatcaggacagtcagaacttattcaagaacacataatcgaagagacggataaggaagta
gtcgtcgtagaccaccacgaaccacagatagagggagacttcacccacctcaacccacac
ttcctcggcattgacggaggagaagccatctcagcagcaggaatggcttatctcttggct
aaggcagtcgacgaagacaaccaggacctcgtcaagtacgccttaatcggtgccacagga
gacgtacagaaacaggaaggagagttcctgggactgaacgaagaactagcggaagaagca
gtagaaaacgatataatcgagaaaaggcaaggacttgacctatacggaagaacgaccaaa
cctctgcagaaaagcctgatgtatacctccgaccctcaccttgaaggcgtctctaacgat
gaatcaggagcaatccaattagttaagtcagccggagttgaaattcgtgagaacggcgac
ttcaagacactggcagatctatccgaggaagaggaaaaacagttaatccacaagatgatc
aagagaggctacgaggtaccacagctcctcaacgacatctacacactgccaaacggatat
gaaatcgacgaattctcaaccataatcaacgcatgtggaagactaggagaaccacggaaa
ggagttaaaattttattggaagatgatttagacctggcagagaagatttcaaccaaatac
ggtcgaaaaatcagttcagccctcagatacttcgaaaacaacaaggaagacaacgatgta
gtatacgaagacacagtaggcataatcgacgcaggttcaaatataggtgaagacttcatc
ggaacagtcacaaccatcaccatgagcaacggagccttcgactgtccggtagtcatgggt
gcagcacatgcagaaaaagaacagatcaagatttcctccagggcgcggaaagaagtagta
gaagatggcttcaacctcggagagatcatcggagaaatctgtgaagaagttgatggtgaa
ggaggaggccacaatatcgcagcaggtgcgaagataccacgagacaaaaaggacgagttc
atggaaagtttggaagaaaaagtggctgaagaggtctaa
DBGET
integrated database retrieval system
