Candidatus Nanohalobium constans: LC1Nh_0794
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Entry
LC1Nh_0794 CDS
T07315
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ncon
Candidatus Nanohalobium constans
Brite
KEGG Orthology (KO) [BR:
ncon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncon03400
]
LC1Nh_0794 (phrB)
Enzymes [BR:
ncon01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LC1Nh_0794 (phrB)
DNA repair and recombination proteins [BR:
ncon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LC1Nh_0794 (phrB)
Prokaryotic type
LC1Nh_0794 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QGA80678
UniProt:
A0A5Q0UGD3
LinkDB
All DBs
Position
649367..650782
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AA seq
471 aa
AA seq
DB search
MTAIVWIRRSLREHDNTALVEASKEHEKVIPFYCVDENYFENSTLGHPRVKFWHDSLKEL
RDNLGDEKGKELIVRKGKPVEELQKLIKETDADAVYHNRDYTPYSRERDQKVQEELEIPV
ETFKDIVMFEKEEILTNSGTPYKVYTYYSKKWFKNEKKRPQEVKEYKTPELESDEIPSLK
ELGYEKPEDMEVWEGGRENGLERIEDFKDKIWNYDENRDYAWKDATSKLSPHLKFGTVSI
REVFWEAERIKARNPNDDTSGIKTWQEELAWRDFYIQVLWNWPETTEKPFLEQYEEIEWR
SKEEAEEDWEAWINGETGVPFVDAGMRQLKKTGWMHNRLRMVVTSFACKDLWLDWKDVHE
YFNKMFIDAEIASMVGGIQWAYSIGTDAQPYFRVFNPFTQGEDYDPDGKYIRKWVPELED
VPDEHIHKPHEMNQIEQENCGVKIGEDYPEPIIDHDEERKKAVERFEDKKD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgacagccatagtctggatcagaagaagcctcagagaacacgacaacacagccctagta
gaagcctctaaagaacacgaaaaagtaatacccttctactgcgtagacgaaaactacttt
gaaaactcgactctaggccacccaagagttaagttctggcacgacagcctgaaagaactc
agagataatctaggcgatgaaaagggaaaagagctcatagttcgaaaaggcaaacccgtc
gaagaactacagaaactaataaaagaaactgatgcggacgcagtctaccataacagagac
tataccccgtacagcagggaaagagaccagaaagttcaagaagaactggagatacctgtt
gagacattcaaggacatcgtcatgttcgagaaagaggaaatactgactaactcaggaacc
ccctacaaagtctacacatactacagcaaaaaatggttcaaaaacgaaaagaagagaccg
caggaagttaaagaatacaagacaccagaactagaatctgatgaaatcccctcgctgaaa
gaattaggatacgaaaaacctgaagacatggaagtctgggaaggcggaagagaaaacggc
ctggaacgaatagaagacttcaaagataagatctggaactacgacgaaaatagagactat
gcatggaaagatgcgaccagcaaactttcccctcacctaaagttcggaacagtctcaatc
agagaggtattctgggaagcagagagaatcaaagccagaaacccaaacgacgatacctcc
ggaatcaagacctggcaagaggagctggcctggcgagacttctacatacaggtactctgg
aactggccagaaaccacagaaaaaccattcctagaacagtacgaggaaatagagtggcgt
tcaaaagaggaagctgaggaagattgggaagcatggataaacggagaaaccggagtaccg
tttgtcgacgcaggcatgagacagttgaaaaagaccgggtggatgcacaaccgactaagg
atggtagtaacatcatttgcatgtaaagacctctggctggactggaaagacgtacacgaa
tacttcaacaagatgtttatcgatgcggagatcgcctcaatggtcggaggaatccagtgg
gcctacagtataggaacagatgcacagccgtacttcagagtcttcaacccattcactcag
ggagaagactacgacccggacggaaaatacatcagaaaatgggttccagaactcgaagat
gttcccgacgaacatatccacaagccgcatgagatgaatcaaatcgaacaggaaaactgc
ggagtaaaaataggagaagactaccctgaacctattatcgaccatgatgaggagaggaag
aaggctgttgagaggtttgaagataaaaaagattag
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