Novosphingobium capsulatum: U0041_01210
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Entry
U0041_01210 CDS
T10206
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ncp Novosphingobium capsulatum
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncp02000
]
U0041_01210
Transporters [BR:
ncp02000
]
Other transporters
Pores ion channels [TC:
1
]
U0041_01210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WQD93248
LinkDB
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Position
272545..274608
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AA seq
687 aa
AA seq
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MRSILMLGSAVLALAPAVAWADAPSPAADAPAADAPASDGAADGGTAGGGSSNAMPIVVT
ATPFGHTIDDTPTVSARVDADAISRAGGASIADALRDVPGVSSTGFASGASRPIIRGMDS
NRVRLLEDGTSSSDVSDIGPDHGIPIDPLSARSIEVVRGAATLRYGSQAIGGVVNTINNR
VPTTLPTEAISAEASTSYTTVNKGVETAALVDGKAGQLALHADGFWRTTDNYDTPLGTQQ
NSWFNGWGGSVGGSYFLPGDKSHVGLAVTHYDARYGIPSDTTYIDMRQTKVMTRNSFALD
SGLLKTFTLDGSYGDYQHSEKNPDGSINTTFKNKEWNGRGELLLNAMGPVRNTALGVEYQ
HRDFSAVGEDSSYLNPATSQNIAGYLFTEIQLADPLHVEASGRVEHVRITGTPADDAFTV
RKYTPVSGAIGVLYTPIKAVKFGLNFSSTGRAPALTELFARGAHDGPQTFETGDPNLKIE
RANSLEGSLRVRQGGFAFTGSVYYTWYKNYIYGELTGRTCDDDGVCTASPDGELRELFYR
QQGAKFRGLEAEMSQELVKTDEGTFTAKVLGDYTRATLDNGSNVPRIPPYRIGGGFAWAG
KTLDAGIMFSHYGRQDKAGDFDTPTAGYNNLNMNVAWRPFKSHPGIELAIVGQNLTDDTQ
RLATALNKDLVVMPGRSVRFVIKAATF
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccatcctgatgctgggatcagcggtcctggctctggcccctgctgtggcctgg
gccgatgccccgtcgccggcggctgatgccccagcggccgacgcgcctgccagcgacggc
gcggccgatggcggcacggcgggcggcggcagcagcaatgccatgccgatcgtggtcacc
gccacgccgtttggccacaccatcgatgatacgcccacggtttccgcgcgcgtcgatgcc
gatgcgatctcgcgcgctggcggtgccagcattgccgatgccctgcgcgatgtgcccggc
gtgtcgtccaccggctttgcctctggcgccagccgcccgatcattcgcggcatggacagc
aaccgcgtgcgcctgctcgaagacggcacatccagctccgacgtgtcggacatcggcccc
gaccacggcattcccatcgatccgctctcggcccgctcgatcgaagtggtgcgcggcgcg
gccacgctgcgctatggcagccaggcgatcggcggcgtggttaacacgatcaacaaccgc
gtgcccaccaccctgccgaccgaggcgatctcggccgaagccagcaccagctacaccacg
gtgaacaagggcgtcgaaaccgcagcgctggtcgatggcaaggctggccagctggccctg
catgccgacgggttctggcgcaccaccgacaactatgacaccccgctcggcacccagcag
aactcctggttcaacggctggggcggctctgttggtggctcgtatttcctgcctggcgac
aagagccacgtgggcctggccgtcacgcactatgacgcgcgctacggcattcccagcgac
accacctatatcgacatgcgccagaccaaggtgatgacgcgcaacagctttgcgctggat
tcgggcctgctcaagacgtttacgctcgatggcagctatggcgattaccagcattcggaa
aagaacccggatggctcgatcaacaccaccttcaagaacaaggaatggaacggccgcggc
gaactgctgctcaatgccatgggcccggtgcgcaacacggcgctgggcgtggaataccag
caccgcgatttctcggccgtgggcgaagacagcagctacctgaacccggccaccagccag
aacatcgccggctacctgttcaccgaaatccagctcgccgatccgctccacgtggaagcc
agcggccgcgtggaacacgtgcgcatcaccggcaccccggccgatgatgccttcaccgtg
cgcaagtacacgccggtgagcggcgcgatcggcgtgctctatacgccgatcaaggcagtc
aagttcggcctcaacttctccagcaccgggcgcgcgccggcgctgaccgaactgttcgca
cgcggcgcccacgatggcccgcagacctttgagaccggcgatcccaacctcaagatcgag
cgcgccaattcgctcgaaggcagcctgcgcgtgcgccagggcggctttgccttcaccggt
tcggtctattacacgtggtacaagaactatatctatggcgagctgaccggccgcacctgc
gatgatgatggcgtgtgcaccgccagccccgacggcgaactgcgcgagctgttctatcgc
cagcagggcgcgaagttccgcgggcttgaagcggaaatgagccaggagctggtcaagacc
gacgaaggcacgttcaccgccaaggtgctgggcgattacacccgcgcaacgctcgacaac
ggctccaacgtgccgcgcatcccgccctaccgcatcggcggcggctttgcctgggcgggc
aagacgctcgatgccgggatcatgttcagccactatggccggcaggacaaggcgggcgat
ttcgacacgcccaccgctggctacaacaacctcaacatgaatgtcgcgtggcgcccgttc
aagagccaccccggcatcgagctggcgatcgtgggccagaacctgaccgacgatacccag
cgcctggccaccgcgctcaacaaggatctggtggtcatgccgggccgctcggtccgcttc
gtgatcaaggccgccacgttctga
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