Novosphingobium capsulatum: U0041_01820
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Entry
U0041_01820 CDS
T10206
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
ncp Novosphingobium capsulatum
Pathway
ncp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
U0041_01820 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncp01007
]
U0041_01820 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncp03016
]
U0041_01820 (hisS)
Enzymes [BR:
ncp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
U0041_01820 (hisS)
Amino acid related enzymes [BR:
ncp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
U0041_01820 (hisS)
Transfer RNA biogenesis [BR:
ncp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
U0041_01820 (hisS)
Prokaryotic type
U0041_01820 (hisS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
tRNA-synt_2
EH_Signature
Motif
Other DBs
NCBI-ProteinID:
WQD93356
LinkDB
All DBs
Position
complement(409700..410962)
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AA seq
420 aa
AA seq
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MSKQTIPTPKAIRGTQDIFGLEAEAFGHVVETFERVRKLYRFRRVEMPVFEKTTVFSRSL
GETTDVVSKEMYSFEDRGGESLTLRPEFTAGLARAYLTNGWQQHAPLKIATHGALFRYER
PQKGRYRQFHQIDAEVIGAAEPQADVELLVMADQLLRELGIADGVTLNLNTLGDAPSREA
WREALIRYFRRYEADLSDESKERLEKNPLRILDSKDPRDKALTQTAPQIDEYLTDEAQDF
FGKVTAGLDAAGVAWVRAPALVRGLDYYRHTAFEFITDRLGAQGTVLGGGRYDGLLEALG
GPATPAVGWAAGIERLAMLVADARTITEPAADVAIVPMGAAAEAACLGLAATLRRGGLTV
DMGYRGNMKKRMSRANESGARFALIVGDEELAAGEATVKNLATGTQERMALHAIPAHIAA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcaaaccattccgacacccaaggctattcgtggcacccaggacattttcggg
cttgaggccgaggcctttggccatgtcgtggaaacgttcgagcgcgtgcgcaagctctat
cgctttcgccgggtggaaatgccggtcttcgaaaagaccacggtgttctcgcgctcgctg
ggcgaaaccaccgacgtggtatcgaaggaaatgtattcgttcgaggatcgcggcggcgaa
tcgctgacgctgcggcccgaattcaccgccggcctcgcccgcgcctatctcaccaatggc
tggcagcagcacgccccgctcaagatcgcgacgcacggggccctgttccgctatgagcgc
ccgcaaaagggccgctatcgccagtttcaccagatcgatgccgaagtgatcggcgcggcc
gaaccgcaggccgacgtggaactgctggtcatggccgatcagttgctgcgcgaactgggc
attgccgatggcgtgacgctcaacctcaataccctgggcgatgcgccgagccgcgaagcc
tggcgtgaggccctgatccgttatttccggcgttatgaagcagatctttccgacgaatcg
aaggagcggcttgagaaaaacccgctccggattctcgattccaaggacccgcgcgacaag
gcacttactcagactgcgccccagattgacgaatatcttactgatgaggcgcaggatttc
tttggcaaggtgacggccggcctcgatgccgccggcgttgcttgggtgcgcgcgccggcg
ctggtgcgcgggctggattactatcgccacaccgcgttcgaattcatcaccgaccggctg
ggcgcgcagggcaccgtgctgggcggcgggcgctatgacggcctgctcgaagcgctgggt
ggcccggccaccccggccgtgggctgggccgcggggatcgaacgcctggccatgctggtg
gccgatgcgcgcaccatcaccgagccggccgccgacgtggcgatcgtgccgatgggcgct
gcggccgaggccgcctgcctgggcctggcggccacgctgcggcgcggcggcctgacggtg
gacatgggctatcgcggcaacatgaagaagcggatgagccgcgccaacgaaagcggcgcg
cgctttgccctgatcgtgggggacgaggaactggcggcgggcgaagccacggtcaagaac
ctggccaccggcacgcaggaacgcatggcgctgcacgcgattccggcgcacatcgccgcc
tga
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