Novosphingobium capsulatum: U0041_02230
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Entry
U0041_02230 CDS
T10206
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ncp Novosphingobium capsulatum
Pathway
ncp03030
DNA replication
ncp03430
Mismatch repair
ncp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U0041_02230 (dnaQ)
03430 Mismatch repair
U0041_02230 (dnaQ)
03440 Homologous recombination
U0041_02230 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncp03032
]
U0041_02230 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ncp03400
]
U0041_02230 (dnaQ)
Enzymes [BR:
ncp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U0041_02230 (dnaQ)
DNA replication proteins [BR:
ncp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U0041_02230 (dnaQ)
DNA repair and recombination proteins [BR:
ncp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U0041_02230 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WQD93437
LinkDB
All DBs
Position
complement(497867..498583)
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AA seq
238 aa
AA seq
DB search
MREIVFDTETTGLDPQGGDRLVELGCVEMVNRVPTGATYHAYFNPERDMPAEAEAVHGLS
AAFLADKPRFAQCAADFLEFIGDAPLVAHNAGFDFGFINAELSAIGMEPVSRDRMVDTVA
IARRKHPGAKLSLDALCTRYGIDRSHRTKHGALLDAELLAQLYVELMGGRQIGLELAAEV
SVSSAVTGAVAAVAAVAEVTVAKTTRIFREPRPHAASEAELARHAEFMAGISNPLWSR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcgtcttcgacaccgaaacgacgggactcgatccgcaaggcggtgaccgg
ctggttgaactcggctgtgtggaaatggtcaatcgggtgcccaccggcgccacctatcac
gcctatttcaaccccgaacgcgacatgccggcagaggctgaggccgtgcacggcctgtcg
gccgccttcctggccgacaagccgcgctttgcccagtgtgccgccgatttcctggagttc
atcggtgatgcgccgctggtggcgcacaacgccgggttcgacttcggcttcatcaacgcc
gaactttccgccatcgggatggagccggtcagccgcgatcgcatggtcgataccgtggcg
atcgcgcggcgcaagcatcccggcgccaagctcagcctcgatgcgctgtgcacccgctat
ggcatcgatcgcagccatcgcaccaagcacggcgcgctgctcgatgccgagcttctggca
caactttacgtcgaattgatgggtggccggcaaatcggcctggaacttgcggcagaggtc
agcgtctcttctgcagttaccggcgctgtggccgcggttgcggccgtggccgaagtgact
gttgccaaaaccacccggatcttccgcgagccccggccgcatgcggccagcgaagcggaa
ttggcccgccatgcggagttcatggcgggcatcagcaacccgctctggtcgcgttag
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