Novosphingobium capsulatum: U0041_04555
Help
Entry
U0041_04555 CDS
T10206
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ncp Novosphingobium capsulatum
Pathway
ncp00300
Lysine biosynthesis
ncp00470
D-Amino acid metabolism
ncp01100
Metabolic pathways
ncp01110
Biosynthesis of secondary metabolites
ncp01120
Microbial metabolism in diverse environments
ncp01230
Biosynthesis of amino acids
Module
ncp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U0041_04555 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U0041_04555 (lysA)
Enzymes [BR:
ncp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
U0041_04555 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WQD93874
LinkDB
All DBs
Position
980077..981336
Genome browser
AA seq
419 aa
AA seq
DB search
MDHFHQVNGVLHAEDIALPMLADAVGTPLYVYSRATLTRHARVFRDALAVLPRVKLAFAV
KSNPNLAVLKVLAAEGYGADVVSGGEMERALAAGMAAEGIVFSGVGKTHAELTRALEAGI
GQFNLESEEEGLELAEIAVGLGKTAACALRVNPDVDAGTHGKISTGKAENKFGVPYDRAA
AIYARLATTPGLAMRGLALHIGSQLSRLDPLEAAFTKIGQLMQAIRAAGHAVTHIDFGGG
VGVPYKAGEVFPQPEDYAAMVARVTQGWDITAMFEPGRVITGNTGVLMTRVVRVKEGVGA
PWVVVDAAMNDLARPALYDAWHDFAAVSPNGETMEANIVGPICESSDTFAMGRTIDAVAR
GDLAVFRTAGAYGATMANTYNSRPLVPEVMVDGTKWAVVADRIEPATILAAERVPEWLA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaccactttcaccaggtgaacggcgtgctgcacgccgaagatattgccctgcccatg
ctggccgatgccgtgggcacgccgctctatgtctattcgcgcgccacgctgacgcgccac
gcccgcgtgttccgcgatgcgctggcggtcctgccgcgcgtcaagctggcctttgccgtc
aagtccaatcccaaccttgccgtgctcaaggtcctggccgccgaaggctacggcgccgac
gtggtttcgggcggtgagatggagcgcgccctggcagccggcatggcggccgagggcatc
gtcttctccggggtgggcaagacccatgccgaactgacccgcgcgctggaggcgggcatc
ggccagttcaacctggaaagcgaggaagaaggcctggaactggcggaaatcgccgtgggg
ctgggcaagaccgcggcctgtgcgctgcgcgtcaaccctgacgtcgatgccggcacgcat
ggcaagatttccaccggcaaggcggaaaacaagtttggcgtgccgtatgatcgcgctgca
gcgatctatgccaggctggcgaccacgccgggcctggccatgcgcggcctggcgctgcat
atcggcagccagctgtcgcggctcgatccgctggaggcagcctttaccaagatcggccag
ctgatgcaggcgatccgcgcggcgggccatgccgtgacgcacatcgatttcggcggcggc
gtgggcgtgccctacaaggccggggaagtctttccccagcccgaagactatgccgcgatg
gtcgcccgcgtgacacagggctgggacattaccgcgatgttcgaacccggccgcgtgatc
accggcaacaccggcgtgctgatgacgcgggtggtgcgggtgaaggaaggcgtcggcgcc
ccgtgggtggtcgtcgacgcggccatgaacgatctggcgcgcccggcgctctatgatgcc
tggcacgatttcgcggcggtttctcccaatggcgaaacgatggaggccaatattgttggc
ccgatctgcgaatcgagcgacacctttgccatgggccgtacgatcgatgccgtggcgcgg
ggcgatctggccgtgttccgcacggctggcgcctatggcgcgacgatggccaacacctac
aattcgcggcccctcgtgcccgaagtgatggtggatggcacgaagtgggcggtggtggcc
gaccggatcgagccagccacgatcctggcggccgaacgcgtgcccgaatggctggcctga
DBGET
integrated database retrieval system