Novosphingobium capsulatum: U0041_04725
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Entry
U0041_04725 CDS
T10206
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ncp Novosphingobium capsulatum
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncp03400
]
U0041_04725
DNA repair and recombination proteins [BR:
ncp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
U0041_04725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
AAA_22
FtsK_SpoIIIE
ResIII
SLFN-g3_helicase
TrwB_AAD_bind
CbiA
Hydrolase
AAA_16
T2SSE
AAA_7
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WQD93899
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All DBs
Position
complement(1016744..1018318)
Genome browser
AA seq
524 aa
AA seq
DB search
MDEIFLGLGAKGEREVLLLGRANRHGLVAGATGTGKTVTLQGMAEQFSRAGVPVFLADVK
GDLSGIAMPGNPTFKHAASLEQRAKDLGIADYAYADNPAVFWDLYGEQGHPIRTTISEMG
PLLLARLMGLNETQEGVLTIAFRYADDNGLLLVDLADLQAVLAACAENAGALATKYGNVT
KASVGAIQRQLLGLESQGADRFFGEPAFEIHDFLQVDEQGRGMVNVLAADKLMQSPKLYA
TFLLWLLSELFEALPEVGDPEKPCLVFFFDEAHLLFDDAPDALMDKVEQVVRLVRSKGVG
VYFVTQNPIDIPEKVAGQLGNRVQHALRAFTPRDQKAIRAAAETFRINPDLDVGQAITEL
KVGEALVSMLDADGAPGMVARTLIAPPRSRLGPVSPAERAAIQSASPFGGKYDTAVNRES
AAEVLAQKAADAAAAAQTVQEQGADAQRAQPRQSPTLWGRAGKAAMGAVASSAGAMVAAQ
IAGKKSRAAPVASGVTAMVGSIATSLGGEALGRFARGLLGGLLR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggacgagattttcctgggcctgggcgcgaagggcgaacgcgaagtgctgttgctgggc
cgggccaaccgccatggcctggtcgccggggcgaccggcaccggcaagaccgtgaccttg
caaggcatggccgaacagttcagccgcgccggggtgccggtgttcctggccgacgtgaaa
ggcgatctttccggcattgccatgcctggcaaccccacgttcaagcacgccgcctcgctg
gaacagcgcgccaaggacctgggcattgccgactatgcctatgccgataacccggccgtg
ttctgggatctgtatggcgagcagggccaccccatccgcacgacgatttccgaaatgggc
ccgctgctgcttgcccggttgatgggcctgaatgaaacccaggaaggcgtgctgaccatc
gcctttcgctatgccgacgacaacggcctgctgctggtggacctggccgacctgcaggcc
gtgctggccgcctgcgccgaaaacgccggggcgctcgccaccaagtatggcaacgtgacc
aaggccagcgtcggcgcgatccagcgccagctgctcggcctggaaagccagggtgccgat
cgcttctttggcgaaccggcctttgaaatccacgatttcctgcaggtggacgaacagggc
cgcggcatggtcaacgtgctggccgccgacaagctgatgcagagccccaagctctatgcc
acgttcctgctgtggctgctgtcggaactgttcgaggcgctgcccgaagtgggcgacccg
gaaaagccgtgcctggtgttcttcttcgatgaagcccacctcttgttcgacgatgcaccc
gatgcgttgatggacaaggtggagcaggtcgtccgcctcgtccgctccaagggcgtgggg
gtctatttcgtcacccaaaacccgatcgatattcccgagaaggtggcaggccagctgggc
aaccgtgtgcagcatgccctgcgcgcgttcaccccgcgcgatcagaaggcgattcgcgcc
gcggctgaaacctttcgcatcaaccccgatctcgatgtgggccaagcgattaccgagctc
aaagtgggcgaagcgctggtctcgatgctcgacgccgatggcgcgccgggcatggtcgca
cgcaccctgatcgcgccgccgcgctcgcgcctggggccggtcagcccggccgagcgtgct
gccatccagtccgccagcccgtttggcggcaagtacgataccgccgtcaaccgcgagagc
gcggccgaagtgctggcacaaaaggcggcagacgccgctgctgcggcgcagaccgtgcag
gaacagggcgcagacgcccagcgtgcccagccgcgccagtcccccacactgtggggccgc
gctggcaaggccgcgatgggcgccgtcgcctcatcggccggagcgatggtcgccgcccag
atcgccggcaagaaatcccgcgcggcgcccgtcgccagcggagtaacggcaatggtcggc
tcgatcgcgacgagcctgggcggcgaagccctgggccgcttcgcgcgcgggctgttgggt
gggttgttgcggtaa
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